Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF140P52738 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.67■□□□□ 0.26
ZNF140P52738 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ZNF140P52738 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ZNF140P52738 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF140P52738 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF140P52738 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ZNF140P52738 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF140P52738 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.67■□□□□ 0.26
ZNF140P52738 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.67■□□□□ 0.26
ZNF140P52738 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF140P52738 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF140P52738 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ZNF140P52738 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF140P52738 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ZNF140P52738 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.67■□□□□ 0.26
ZNF140P52738 MED15P5-201ENST00000423150 992 ntBASIC16.67■□□□□ 0.26
ZNF140P52738 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF140P52738 AL591424.1-201ENST00000442569 1213 ntBASIC16.67■□□□□ 0.26
ZNF140P52738 KRT19P2-202ENST00000557173 1012 ntBASIC16.67■□□□□ 0.26
ZNF140P52738 MIR3909-201ENST00000579518 119 ntBASIC16.67■□□□□ 0.26
ZNF140P52738 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
ZNF140P52738 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.67■□□□□ 0.26
ZNF140P52738 AC027601.4-201ENST00000611259 610 ntBASIC16.67■□□□□ 0.26
ZNF140P52738 AC004877.2-201ENST00000623941 599 ntBASIC16.67■□□□□ 0.26
ZNF140P52738 AC007064.4-201ENST00000637740 555 ntBASIC16.67■□□□□ 0.26
ZNF140P52738 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF140P52738 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF140P52738 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF140P52738 PCDHB19P-201ENST00000570871 2371 ntBASIC16.67■□□□□ 0.26
ZNF140P52738 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF140P52738 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF140P52738 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF140P52738 BCAR1-209ENST00000546196 1340 ntBASIC16.67■□□□□ 0.26
ZNF140P52738 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF140P52738 GPAA1P2-202ENST00000606848 1787 ntBASIC16.66■□□□□ 0.26
ZNF140P52738 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF140P52738 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ZNF140P52738 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF140P52738 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF140P52738 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF140P52738 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF140P52738 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF140P52738 ME2P1-201ENST00000426028 1970 ntBASIC16.66■□□□□ 0.26
ZNF140P52738 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
ZNF140P52738 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF140P52738 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF140P52738 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF140P52738 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF140P52738 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF140P52738 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF140P52738 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF140P52738 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.66■□□□□ 0.26
ZNF140P52738 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF140P52738 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF140P52738 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF140P52738 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.66■□□□□ 0.26
ZNF140P52738 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.66■□□□□ 0.26
ZNF140P52738 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF140P52738 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
ZNF140P52738 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.66■□□□□ 0.26
ZNF140P52738 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.66■□□□□ 0.26
ZNF140P52738 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.66■□□□□ 0.26
ZNF140P52738 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ZNF140P52738 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF140P52738 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF140P52738 AC025580.3-201ENST00000617932 1424 ntBASIC16.66■□□□□ 0.26
ZNF140P52738 FAM197Y3-203ENST00000618346 717 ntBASIC16.66■□□□□ 0.26
ZNF140P52738 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF140P52738 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF140P52738 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF140P52738 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ZNF140P52738 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ZNF140P52738 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF140P52738 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ZNF140P52738 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF140P52738 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ZNF140P52738 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF140P52738 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF140P52738 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF140P52738 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF140P52738 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF140P52738 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ZNF140P52738 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF140P52738 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF140P52738 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF140P52738 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF140P52738 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF140P52738 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF140P52738 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF140P52738 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF140P52738 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF140P52738 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
ZNF140P52738 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF140P52738 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF140P52738 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ZNF140P52738 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.65■□□□□ 0.26
ZNF140P52738 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF140P52738 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF140P52738 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms