Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCFC1P51610 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCFC1P51610 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HCFC1P51610 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.53□□□□□ -0.08
HCFC1P51610 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HCFC1P51610 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.53□□□□□ -0.08
HCFC1P51610 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.53□□□□□ -0.08
HCFC1P51610 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HCFC1P51610 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HCFC1P51610 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HCFC1P51610 AIRN-201ENST00000601203 4374 ntBASIC14.53□□□□□ -0.08
HCFC1P51610 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HCFC1P51610 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.53□□□□□ -0.08
HCFC1P51610 KRT18P34-201ENST00000488218 1270 ntBASIC14.53□□□□□ -0.08
HCFC1P51610 API5-211ENST00000534695 560 ntTSL 5 BASIC14.53□□□□□ -0.08
HCFC1P51610 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.53□□□□□ -0.08
HCFC1P51610 WASH4P-201ENST00000564273 1246 ntBASIC14.53□□□□□ -0.08
HCFC1P51610 AC018529.1-201ENST00000613063 361 ntBASIC14.53□□□□□ -0.08
HCFC1P51610 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HCFC1P51610 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.53□□□□□ -0.08
HCFC1P51610 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.53□□□□□ -0.08
HCFC1P51610 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HCFC1P51610 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.53□□□□□ -0.08
HCFC1P51610 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HCFC1P51610 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HCFC1P51610 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.53□□□□□ -0.08
HCFC1P51610 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HCFC1P51610 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HCFC1P51610 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HCFC1P51610 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.53□□□□□ -0.08
HCFC1P51610 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.53□□□□□ -0.08
HCFC1P51610 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
HCFC1P51610 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HCFC1P51610 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.53□□□□□ -0.08
HCFC1P51610 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
HCFC1P51610 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.53□□□□□ -0.08
HCFC1P51610 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.53□□□□□ -0.08
HCFC1P51610 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.53□□□□□ -0.08
HCFC1P51610 AL080243.2-201ENST00000418783 582 ntBASIC14.53□□□□□ -0.08
HCFC1P51610 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.53□□□□□ -0.08
HCFC1P51610 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.53□□□□□ -0.08
HCFC1P51610 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.53□□□□□ -0.08
HCFC1P51610 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.53□□□□□ -0.08
HCFC1P51610 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
HCFC1P51610 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HCFC1P51610 AC004233.3-201ENST00000607794 1269 ntBASIC14.53□□□□□ -0.08
HCFC1P51610 MIR6752-201ENST00000618442 71 ntBASIC14.53□□□□□ -0.08
HCFC1P51610 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.53□□□□□ -0.08
HCFC1P51610 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.53□□□□□ -0.08
HCFC1P51610 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.53□□□□□ -0.08
HCFC1P51610 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HCFC1P51610 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HCFC1P51610 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
HCFC1P51610 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HCFC1P51610 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
HCFC1P51610 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HCFC1P51610 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.52□□□□□ -0.08
HCFC1P51610 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HCFC1P51610 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.52□□□□□ -0.08
HCFC1P51610 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.52□□□□□ -0.08
HCFC1P51610 PCDHA12-202ENST00000613593 2588 ntBASIC14.52□□□□□ -0.08
HCFC1P51610 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HCFC1P51610 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
HCFC1P51610 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HCFC1P51610 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HCFC1P51610 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HCFC1P51610 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.52□□□□□ -0.09
HCFC1P51610 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.52□□□□□ -0.09
HCFC1P51610 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
HCFC1P51610 ACA64.2-201ENST00000459014 129 ntBASIC14.52□□□□□ -0.09
HCFC1P51610 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
HCFC1P51610 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.52□□□□□ -0.09
HCFC1P51610 RARRES2P9-201ENST00000565168 469 ntBASIC14.52□□□□□ -0.09
HCFC1P51610 AL844908.2-201ENST00000609461 460 ntBASIC14.52□□□□□ -0.09
HCFC1P51610 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HCFC1P51610 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HCFC1P51610 LINC00895-201ENST00000629028 1637 ntBASIC14.52□□□□□ -0.09
HCFC1P51610 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.52□□□□□ -0.09
HCFC1P51610 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
HCFC1P51610 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HCFC1P51610 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HCFC1P51610 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HCFC1P51610 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HCFC1P51610 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
HCFC1P51610 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.52□□□□□ -0.09
HCFC1P51610 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
HCFC1P51610 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HCFC1P51610 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HCFC1P51610 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HCFC1P51610 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.52□□□□□ -0.09
HCFC1P51610 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.51□□□□□ -0.09
HCFC1P51610 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HCFC1P51610 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.51□□□□□ -0.09
HCFC1P51610 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HCFC1P51610 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HCFC1P51610 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HCFC1P51610 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HCFC1P51610 MTND6P24-201ENST00000440466 518 ntBASIC14.51□□□□□ -0.09
HCFC1P51610 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HCFC1P51610 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms