Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.64■□□□□ 0.73
MRE11P49959 SLC25A1P2-201ENST00000430693 912 ntBASIC19.64■□□□□ 0.73
MRE11P49959 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.64■□□□□ 0.73
MRE11P49959 AP002469.2-201ENST00000531724 424 ntBASIC19.64■□□□□ 0.73
MRE11P49959 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.64■□□□□ 0.73
MRE11P49959 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MRE11P49959 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.64■□□□□ 0.73
MRE11P49959 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MRE11P49959 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.64■□□□□ 0.73
MRE11P49959 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MRE11P49959 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
MRE11P49959 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
MRE11P49959 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.64■□□□□ 0.73
MRE11P49959 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MRE11P49959 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MRE11P49959 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
MRE11P49959 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MRE11P49959 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
MRE11P49959 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MRE11P49959 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.63■□□□□ 0.73
MRE11P49959 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRE11P49959 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
MRE11P49959 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.63■□□□□ 0.73
MRE11P49959 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRE11P49959 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.63■□□□□ 0.73
MRE11P49959 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MRE11P49959 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.63■□□□□ 0.73
MRE11P49959 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MRE11P49959 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MRE11P49959 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRE11P49959 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
MRE11P49959 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.63■□□□□ 0.73
MRE11P49959 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRE11P49959 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRE11P49959 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRE11P49959 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
MRE11P49959 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.63■□□□□ 0.73
MRE11P49959 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRE11P49959 AC104390.1-201ENST00000555663 520 ntBASIC19.63■□□□□ 0.73
MRE11P49959 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
MRE11P49959 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.63■□□□□ 0.73
MRE11P49959 AC008687.5-201ENST00000593746 558 ntBASIC19.63■□□□□ 0.73
MRE11P49959 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRE11P49959 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRE11P49959 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRE11P49959 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRE11P49959 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRE11P49959 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MRE11P49959 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRE11P49959 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
MRE11P49959 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRE11P49959 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRE11P49959 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRE11P49959 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRE11P49959 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MRE11P49959 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRE11P49959 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MRE11P49959 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
MRE11P49959 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRE11P49959 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MRE11P49959 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
MRE11P49959 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.62■□□□□ 0.73
MRE11P49959 AC013268.4-201ENST00000637413 2228 ntBASIC19.62■□□□□ 0.73
MRE11P49959 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
MRE11P49959 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRE11P49959 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRE11P49959 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MRE11P49959 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MRE11P49959 NUS1P1-201ENST00000446295 882 ntBASIC19.62■□□□□ 0.73
MRE11P49959 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.62■□□□□ 0.73
MRE11P49959 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.62■□□□□ 0.73
MRE11P49959 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.62■□□□□ 0.73
MRE11P49959 ME2P1-201ENST00000426028 1970 ntBASIC19.62■□□□□ 0.73
MRE11P49959 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MRE11P49959 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRE11P49959 AL391256.1-201ENST00000443260 1855 ntBASIC19.62■□□□□ 0.73
MRE11P49959 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRE11P49959 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRE11P49959 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC19.62■□□□□ 0.73
MRE11P49959 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRE11P49959 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRE11P49959 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
MRE11P49959 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MRE11P49959 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MRE11P49959 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MRE11P49959 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.61■□□□□ 0.73
MRE11P49959 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MRE11P49959 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MRE11P49959 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.61■□□□□ 0.73
MRE11P49959 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.61■□□□□ 0.73
MRE11P49959 KRT18P1-202ENST00000452408 1331 ntBASIC19.61■□□□□ 0.73
MRE11P49959 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
MRE11P49959 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
MRE11P49959 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MRE11P49959 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MRE11P49959 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.61■□□□□ 0.73
MRE11P49959 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.61■□□□□ 0.73
MRE11P49959 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.61■□□□□ 0.73
MRE11P49959 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MRE11P49959 MIR4674-201ENST00000582457 87 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms