Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.29■□□□□ 0.52
CASP4P49662 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.29■□□□□ 0.52
CASP4P49662 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CASP4P49662 AC010507.1-201ENST00000633895 436 ntBASIC18.29■□□□□ 0.52
CASP4P49662 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.29■□□□□ 0.52
CASP4P49662 KRT8P39-201ENST00000396270 1433 ntBASIC18.29■□□□□ 0.52
CASP4P49662 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CASP4P49662 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASP4P49662 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.29■□□□□ 0.52
CASP4P49662 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CASP4P49662 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.29■□□□□ 0.52
CASP4P49662 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CASP4P49662 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CASP4P49662 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
CASP4P49662 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.29■□□□□ 0.52
CASP4P49662 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASP4P49662 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CASP4P49662 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASP4P49662 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.29■□□□□ 0.52
CASP4P49662 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASP4P49662 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CASP4P49662 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASP4P49662 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.28■□□□□ 0.52
CASP4P49662 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASP4P49662 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CASP4P49662 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CASP4P49662 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASP4P49662 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASP4P49662 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.28■□□□□ 0.52
CASP4P49662 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CASP4P49662 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CASP4P49662 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.28■□□□□ 0.52
CASP4P49662 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CASP4P49662 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.28■□□□□ 0.52
CASP4P49662 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.28■□□□□ 0.52
CASP4P49662 AL031731.1-201ENST00000642131 2094 ntBASIC18.28■□□□□ 0.52
CASP4P49662 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASP4P49662 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CASP4P49662 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CASP4P49662 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.28■□□□□ 0.52
CASP4P49662 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.28■□□□□ 0.52
CASP4P49662 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.28■□□□□ 0.52
CASP4P49662 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.28■□□□□ 0.52
CASP4P49662 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.28■□□□□ 0.52
CASP4P49662 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.28■□□□□ 0.52
CASP4P49662 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CASP4P49662 AC106730.1-201ENST00000566722 1090 ntBASIC18.28■□□□□ 0.52
CASP4P49662 AC018845.2-201ENST00000568326 409 ntBASIC18.28■□□□□ 0.52
CASP4P49662 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.28■□□□□ 0.52
CASP4P49662 AC064836.3-201ENST00000607928 673 ntBASIC18.28■□□□□ 0.52
CASP4P49662 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASP4P49662 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASP4P49662 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.28■□□□□ 0.52
CASP4P49662 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASP4P49662 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASP4P49662 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.27■□□□□ 0.52
CASP4P49662 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASP4P49662 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CASP4P49662 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASP4P49662 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.27■□□□□ 0.52
CASP4P49662 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASP4P49662 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASP4P49662 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.27■□□□□ 0.52
CASP4P49662 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASP4P49662 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.27■□□□□ 0.52
CASP4P49662 GGT4P-201ENST00000623672 1708 ntBASIC18.27■□□□□ 0.52
CASP4P49662 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CASP4P49662 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASP4P49662 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CASP4P49662 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASP4P49662 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASP4P49662 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.52
CASP4P49662 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASP4P49662 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASP4P49662 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CASP4P49662 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.27■□□□□ 0.52
CASP4P49662 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.27■□□□□ 0.52
CASP4P49662 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.27■□□□□ 0.52
CASP4P49662 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
CASP4P49662 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.27■□□□□ 0.52
CASP4P49662 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.27■□□□□ 0.52
CASP4P49662 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
CASP4P49662 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.27■□□□□ 0.52
CASP4P49662 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASP4P49662 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.27■□□□□ 0.52
CASP4P49662 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.27■□□□□ 0.51
CASP4P49662 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CASP4P49662 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CASP4P49662 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CASP4P49662 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CASP4P49662 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.26■□□□□ 0.51
CASP4P49662 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CASP4P49662 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASP4P49662 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CASP4P49662 AL022342.1-201ENST00000400363 863 ntBASIC18.26■□□□□ 0.51
CASP4P49662 HMGA1P7-201ENST00000406908 502 ntBASIC18.26■□□□□ 0.51
CASP4P49662 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CASP4P49662 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.26■□□□□ 0.51
CASP4P49662 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CASP4P49662 HCG4-201ENST00000418983 998 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms