Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.66■□□□□ 0.58
CENPFP49454 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPFP49454 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPFP49454 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.66■□□□□ 0.58
CENPFP49454 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CENPFP49454 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.66■□□□□ 0.58
CENPFP49454 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.66■□□□□ 0.58
CENPFP49454 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.66■□□□□ 0.58
CENPFP49454 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CENPFP49454 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.66■□□□□ 0.58
CENPFP49454 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPFP49454 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CENPFP49454 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPFP49454 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.66■□□□□ 0.58
CENPFP49454 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPFP49454 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CENPFP49454 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPFP49454 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPFP49454 C2orf69P2-201ENST00000562032 1123 ntBASIC18.66■□□□□ 0.58
CENPFP49454 AC103810.3-201ENST00000583567 96 ntBASIC18.66■□□□□ 0.58
CENPFP49454 AC079328.2-201ENST00000561241 3354 ntBASIC18.66■□□□□ 0.58
CENPFP49454 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPFP49454 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPFP49454 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CENPFP49454 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPFP49454 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.65■□□□□ 0.58
CENPFP49454 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPFP49454 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.65■□□□□ 0.58
CENPFP49454 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.65■□□□□ 0.58
CENPFP49454 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
CENPFP49454 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPFP49454 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CENPFP49454 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPFP49454 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.65■□□□□ 0.58
CENPFP49454 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPFP49454 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.65■□□□□ 0.58
CENPFP49454 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.65■□□□□ 0.58
CENPFP49454 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.65■□□□□ 0.58
CENPFP49454 MIR1247-201ENST00000408206 136 ntBASIC18.65■□□□□ 0.58
CENPFP49454 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.65■□□□□ 0.58
CENPFP49454 AL033527.5-201ENST00000641382 801 ntBASIC18.65■□□□□ 0.58
CENPFP49454 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPFP49454 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPFP49454 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CENPFP49454 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPFP49454 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
CENPFP49454 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.64■□□□□ 0.58
CENPFP49454 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CENPFP49454 FXNP2-201ENST00000411625 547 ntBASIC18.64■□□□□ 0.58
CENPFP49454 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.64■□□□□ 0.58
CENPFP49454 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.64■□□□□ 0.58
CENPFP49454 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CENPFP49454 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CENPFP49454 RN7SL828P-201ENST00000607615 303 ntBASIC18.64■□□□□ 0.58
CENPFP49454 AC093726.1-201ENST00000608064 963 ntBASIC18.64■□□□□ 0.58
CENPFP49454 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.64■□□□□ 0.58
CENPFP49454 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CENPFP49454 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CENPFP49454 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.64■□□□□ 0.57
CENPFP49454 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.64■□□□□ 0.57
CENPFP49454 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CENPFP49454 MIR3615-201ENST00000581999 87 ntBASIC18.64■□□□□ 0.57
CENPFP49454 WFDC1-204ENST00000613603 549 ntBASIC18.64■□□□□ 0.57
CENPFP49454 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CENPFP49454 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CENPFP49454 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CENPFP49454 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.64■□□□□ 0.57
CENPFP49454 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CENPFP49454 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CENPFP49454 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CENPFP49454 MIR663B-201ENST00000408361 115 ntBASIC18.64■□□□□ 0.57
CENPFP49454 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CENPFP49454 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.64■□□□□ 0.57
CENPFP49454 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CENPFP49454 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CENPFP49454 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CENPFP49454 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CENPFP49454 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CENPFP49454 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CENPFP49454 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.63■□□□□ 0.57
CENPFP49454 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.63■□□□□ 0.57
CENPFP49454 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.63■□□□□ 0.57
CENPFP49454 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CENPFP49454 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPFP49454 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.63■□□□□ 0.57
CENPFP49454 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPFP49454 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CENPFP49454 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CENPFP49454 TPRX2P-201ENST00000535362 881 ntBASIC18.63■□□□□ 0.57
CENPFP49454 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPFP49454 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.63■□□□□ 0.57
CENPFP49454 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CENPFP49454 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPFP49454 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPFP49454 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPFP49454 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CENPFP49454 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.63■□□□□ 0.57
CENPFP49454 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CENPFP49454 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CENPFP49454 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms