Protein–RNA interactions for Protein: P46094

XCR1, Chemokine XC receptor 1, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1P46094 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
XCR1P46094 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.02■□□□□ 0.16
XCR1P46094 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
XCR1P46094 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
XCR1P46094 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
XCR1P46094 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
XCR1P46094 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.02■□□□□ 0.16
XCR1P46094 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.02■□□□□ 0.16
XCR1P46094 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.02■□□□□ 0.16
XCR1P46094 FAM185BP-201ENST00000443595 716 ntBASIC16.02■□□□□ 0.16
XCR1P46094 AC107918.2-201ENST00000530817 355 ntBASIC16.02■□□□□ 0.16
XCR1P46094 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.02■□□□□ 0.16
XCR1P46094 AC002347.1-201ENST00000569543 541 ntBASIC16.02■□□□□ 0.16
XCR1P46094 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.02■□□□□ 0.16
XCR1P46094 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.02■□□□□ 0.16
XCR1P46094 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
XCR1P46094 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.02■□□□□ 0.15
XCR1P46094 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.02■□□□□ 0.15
XCR1P46094 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
XCR1P46094 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
XCR1P46094 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.02■□□□□ 0.15
XCR1P46094 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.02■□□□□ 0.15
XCR1P46094 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
XCR1P46094 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
XCR1P46094 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.02■□□□□ 0.15
XCR1P46094 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.02■□□□□ 0.15
XCR1P46094 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
XCR1P46094 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
XCR1P46094 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.01■□□□□ 0.15
XCR1P46094 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
XCR1P46094 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
XCR1P46094 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
XCR1P46094 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
XCR1P46094 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.01■□□□□ 0.15
XCR1P46094 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
XCR1P46094 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
XCR1P46094 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
XCR1P46094 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.01■□□□□ 0.15
XCR1P46094 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
XCR1P46094 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
XCR1P46094 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
XCR1P46094 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
XCR1P46094 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
XCR1P46094 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.01■□□□□ 0.15
XCR1P46094 BX842568.4-201ENST00000421222 227 ntBASIC16.01■□□□□ 0.15
XCR1P46094 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.01■□□□□ 0.15
XCR1P46094 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.01■□□□□ 0.15
XCR1P46094 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
XCR1P46094 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.01■□□□□ 0.15
XCR1P46094 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
XCR1P46094 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.01■□□□□ 0.15
XCR1P46094 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.01■□□□□ 0.15
XCR1P46094 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.01■□□□□ 0.15
XCR1P46094 AC023511.2-201ENST00000618803 211 ntBASIC16.01■□□□□ 0.15
XCR1P46094 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.01■□□□□ 0.15
XCR1P46094 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
XCR1P46094 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
XCR1P46094 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
XCR1P46094 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.01■□□□□ 0.15
XCR1P46094 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
XCR1P46094 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.01■□□□□ 0.15
XCR1P46094 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
XCR1P46094 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
XCR1P46094 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
XCR1P46094 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
XCR1P46094 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
XCR1P46094 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.01■□□□□ 0.15
XCR1P46094 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
XCR1P46094 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
XCR1P46094 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
XCR1P46094 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
XCR1P46094 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16■□□□□ 0.15
XCR1P46094 BCAR1-209ENST00000546196 1340 ntBASIC16■□□□□ 0.15
XCR1P46094 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16■□□□□ 0.15
XCR1P46094 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16■□□□□ 0.15
XCR1P46094 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
XCR1P46094 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
XCR1P46094 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
XCR1P46094 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16■□□□□ 0.15
XCR1P46094 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
XCR1P46094 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
XCR1P46094 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16■□□□□ 0.15
XCR1P46094 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
XCR1P46094 COX10-202ENST00000429152 875 ntTSL 2 BASIC16■□□□□ 0.15
XCR1P46094 RHOQP3-201ENST00000437982 621 ntBASIC16■□□□□ 0.15
XCR1P46094 AC092865.5-201ENST00000545435 363 ntBASIC16■□□□□ 0.15
XCR1P46094 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16■□□□□ 0.15
XCR1P46094 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16■□□□□ 0.15
XCR1P46094 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
XCR1P46094 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16■□□□□ 0.15
XCR1P46094 ACTL9-202ENST00000612068 1252 ntBASIC16■□□□□ 0.15
XCR1P46094 REXO1L3P-201ENST00000622202 1288 ntBASIC16■□□□□ 0.15
XCR1P46094 AC004877.2-201ENST00000623941 599 ntBASIC16■□□□□ 0.15
XCR1P46094 AC007064.4-201ENST00000637740 555 ntBASIC16■□□□□ 0.15
XCR1P46094 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16■□□□□ 0.15
XCR1P46094 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
XCR1P46094 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16■□□□□ 0.15
XCR1P46094 PCDH8P1-201ENST00000428983 2773 ntBASIC16■□□□□ 0.15
XCR1P46094 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
XCR1P46094 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms