Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CBX5P45973 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CBX5P45973 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CBX5P45973 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CBX5P45973 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.55□□□□□ -0.08
CBX5P45973 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CBX5P45973 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
CBX5P45973 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CBX5P45973 AL137784.3-201ENST00000623858 2288 ntBASIC14.54□□□□□ -0.08
CBX5P45973 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.54□□□□□ -0.08
CBX5P45973 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.54□□□□□ -0.08
CBX5P45973 MMP23A-201ENST00000234610 1017 ntBASIC14.54□□□□□ -0.08
CBX5P45973 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CBX5P45973 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.54□□□□□ -0.08
CBX5P45973 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 AC103564.2-201ENST00000432853 1299 ntBASIC14.54□□□□□ -0.08
CBX5P45973 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.54□□□□□ -0.08
CBX5P45973 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CBX5P45973 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CBX5P45973 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.54□□□□□ -0.08
CBX5P45973 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CBX5P45973 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 GPR89P-201ENST00000407924 1495 ntBASIC14.54□□□□□ -0.08
CBX5P45973 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.54□□□□□ -0.08
CBX5P45973 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
CBX5P45973 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
CBX5P45973 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
CBX5P45973 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.54□□□□□ -0.08
CBX5P45973 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.54□□□□□ -0.08
CBX5P45973 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CBX5P45973 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.54□□□□□ -0.08
CBX5P45973 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CBX5P45973 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CBX5P45973 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
CBX5P45973 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.53□□□□□ -0.08
CBX5P45973 AC132872.4-202ENST00000622924 2756 ntBASIC14.53□□□□□ -0.08
CBX5P45973 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.53□□□□□ -0.08
CBX5P45973 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CBX5P45973 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.53□□□□□ -0.08
CBX5P45973 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CBX5P45973 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.53□□□□□ -0.08
CBX5P45973 AC122714.2-201ENST00000502787 707 ntBASIC14.53□□□□□ -0.08
CBX5P45973 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.53□□□□□ -0.08
CBX5P45973 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CBX5P45973 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CBX5P45973 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CBX5P45973 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CBX5P45973 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CBX5P45973 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.53□□□□□ -0.08
CBX5P45973 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.53□□□□□ -0.08
CBX5P45973 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms