Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TM4SF1P30408 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TM4SF1P30408 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.6■□□□□ 0.89
TM4SF1P30408 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TM4SF1P30408 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TM4SF1P30408 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TM4SF1P30408 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.6■□□□□ 0.89
TM4SF1P30408 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TM4SF1P30408 AC123567.1-201ENST00000548294 1261 ntBASIC20.6■□□□□ 0.89
TM4SF1P30408 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.6■□□□□ 0.89
TM4SF1P30408 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.6■□□□□ 0.89
TM4SF1P30408 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.6■□□□□ 0.89
TM4SF1P30408 MIR6775-201ENST00000617557 69 ntBASIC20.6■□□□□ 0.89
TM4SF1P30408 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TM4SF1P30408 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.6■□□□□ 0.89
TM4SF1P30408 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TM4SF1P30408 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TM4SF1P30408 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.6■□□□□ 0.89
TM4SF1P30408 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TM4SF1P30408 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TM4SF1P30408 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.6■□□□□ 0.89
TM4SF1P30408 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.6■□□□□ 0.89
TM4SF1P30408 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TM4SF1P30408 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF1P30408 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.59■□□□□ 0.89
TM4SF1P30408 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF1P30408 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.59■□□□□ 0.89
TM4SF1P30408 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.59■□□□□ 0.89
TM4SF1P30408 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF1P30408 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.59■□□□□ 0.89
TM4SF1P30408 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.59■□□□□ 0.89
TM4SF1P30408 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF1P30408 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF1P30408 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TM4SF1P30408 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.59■□□□□ 0.89
TM4SF1P30408 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF1P30408 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC20.59■□□□□ 0.89
TM4SF1P30408 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.59■□□□□ 0.89
TM4SF1P30408 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.59■□□□□ 0.89
TM4SF1P30408 AC124947.2-201ENST00000547118 1133 ntBASIC20.59■□□□□ 0.89
TM4SF1P30408 SNX29P1-201ENST00000548357 1007 ntBASIC20.59■□□□□ 0.89
TM4SF1P30408 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TM4SF1P30408 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC20.59■□□□□ 0.89
TM4SF1P30408 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.59■□□□□ 0.89
TM4SF1P30408 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF1P30408 COX11-210ENST00000639671 696 ntBASIC20.59■□□□□ 0.89
TM4SF1P30408 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF1P30408 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF1P30408 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF1P30408 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF1P30408 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF1P30408 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TM4SF1P30408 LINC02012-201ENST00000608206 1725 ntBASIC20.58■□□□□ 0.89
TM4SF1P30408 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.58■□□□□ 0.89
TM4SF1P30408 TUBB8P12-201ENST00000308911 1335 ntBASIC20.58■□□□□ 0.89
TM4SF1P30408 TUBB7P-202ENST00000428444 1305 ntBASIC20.58■□□□□ 0.89
TM4SF1P30408 TUBB8P7-204ENST00000567960 1332 ntBASIC20.58■□□□□ 0.89
TM4SF1P30408 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TM4SF1P30408 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.58■□□□□ 0.89
TM4SF1P30408 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TM4SF1P30408 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TM4SF1P30408 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TM4SF1P30408 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TM4SF1P30408 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.58■□□□□ 0.89
TM4SF1P30408 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.58■□□□□ 0.89
TM4SF1P30408 AC093724.1-201ENST00000448659 1027 ntBASIC20.58■□□□□ 0.89
TM4SF1P30408 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.58■□□□□ 0.89
TM4SF1P30408 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.58■□□□□ 0.89
TM4SF1P30408 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.58■□□□□ 0.89
TM4SF1P30408 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC20.58■□□□□ 0.89
TM4SF1P30408 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
TM4SF1P30408 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TM4SF1P30408 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.58■□□□□ 0.88
TM4SF1P30408 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TM4SF1P30408 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TM4SF1P30408 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TM4SF1P30408 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TM4SF1P30408 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TM4SF1P30408 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TM4SF1P30408 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF1P30408 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.57■□□□□ 0.88
TM4SF1P30408 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF1P30408 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.57■□□□□ 0.88
TM4SF1P30408 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF1P30408 AC092053.1-201ENST00000605787 1936 ntBASIC20.57■□□□□ 0.88
TM4SF1P30408 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TM4SF1P30408 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF1P30408 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.57■□□□□ 0.88
TM4SF1P30408 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TM4SF1P30408 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF1P30408 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.57■□□□□ 0.88
TM4SF1P30408 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF1P30408 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.57■□□□□ 0.88
TM4SF1P30408 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.57■□□□□ 0.88
TM4SF1P30408 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.57■□□□□ 0.88
TM4SF1P30408 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.57■□□□□ 0.88
TM4SF1P30408 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TM4SF1P30408 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF1P30408 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.57■□□□□ 0.88
TM4SF1P30408 AP005482.1-201ENST00000563722 1273 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms