Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC241585.1-201ENST00000433527 519 ntBASIC19.06■□□□□ 0.64
CNGA1P29973 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.06■□□□□ 0.64
CNGA1P29973 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CNGA1P29973 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.06■□□□□ 0.64
CNGA1P29973 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CNGA1P29973 AL358472.5-202ENST00000641448 1267 ntBASIC19.06■□□□□ 0.64
CNGA1P29973 AC084121.4-201ENST00000641598 221 ntBASIC19.06■□□□□ 0.64
CNGA1P29973 AF228730.8-201ENST00000642140 221 ntBASIC19.06■□□□□ 0.64
CNGA1P29973 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNGA1P29973 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNGA1P29973 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.06■□□□□ 0.64
CNGA1P29973 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNGA1P29973 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNGA1P29973 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNGA1P29973 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CNGA1P29973 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.06■□□□□ 0.64
CNGA1P29973 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
CNGA1P29973 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.06■□□□□ 0.64
CNGA1P29973 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CNGA1P29973 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.05■□□□□ 0.64
CNGA1P29973 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.05■□□□□ 0.64
CNGA1P29973 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CNGA1P29973 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.05■□□□□ 0.64
CNGA1P29973 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA1P29973 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CNGA1P29973 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA1P29973 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.05■□□□□ 0.64
CNGA1P29973 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA1P29973 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.05■□□□□ 0.64
CNGA1P29973 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA1P29973 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.05■□□□□ 0.64
CNGA1P29973 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.05■□□□□ 0.64
CNGA1P29973 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA1P29973 AC027369.6-201ENST00000525520 931 ntBASIC19.05■□□□□ 0.64
CNGA1P29973 AC109635.5-201ENST00000533593 962 ntBASIC19.05■□□□□ 0.64
CNGA1P29973 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.05■□□□□ 0.64
CNGA1P29973 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.05■□□□□ 0.64
CNGA1P29973 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.05■□□□□ 0.64
CNGA1P29973 AC008267.7-201ENST00000624570 1194 ntBASIC19.05■□□□□ 0.64
CNGA1P29973 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA1P29973 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CNGA1P29973 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA1P29973 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
CNGA1P29973 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA1P29973 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA1P29973 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CNGA1P29973 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA1P29973 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA1P29973 CROCCP2-202ENST00000412962 2773 ntBASIC19.04■□□□□ 0.64
CNGA1P29973 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA1P29973 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.04■□□□□ 0.64
CNGA1P29973 AL353732.1-201ENST00000569618 1459 ntBASIC19.04■□□□□ 0.64
CNGA1P29973 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA1P29973 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA1P29973 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA1P29973 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
CNGA1P29973 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA1P29973 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA1P29973 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CNGA1P29973 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA1P29973 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA1P29973 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA1P29973 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
CNGA1P29973 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.04■□□□□ 0.64
CNGA1P29973 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CNGA1P29973 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.04■□□□□ 0.64
CNGA1P29973 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.04■□□□□ 0.64
CNGA1P29973 AC007274.1-201ENST00000439805 662 ntBASIC19.04■□□□□ 0.64
CNGA1P29973 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CNGA1P29973 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA1P29973 AP000842.3-202ENST00000569238 1080 ntBASIC19.04■□□□□ 0.64
CNGA1P29973 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CNGA1P29973 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CNGA1P29973 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA1P29973 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA1P29973 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.04■□□□□ 0.64
CNGA1P29973 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CNGA1P29973 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA1P29973 AC141586.5-201ENST00000624546 2050 ntBASIC19.04■□□□□ 0.64
CNGA1P29973 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNGA1P29973 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNGA1P29973 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.03■□□□□ 0.64
CNGA1P29973 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CNGA1P29973 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNGA1P29973 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNGA1P29973 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNGA1P29973 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CNGA1P29973 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.03■□□□□ 0.64
CNGA1P29973 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNGA1P29973 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.03■□□□□ 0.64
CNGA1P29973 AC016396.2-201ENST00000562575 1417 ntBASIC19.03■□□□□ 0.64
CNGA1P29973 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNGA1P29973 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CNGA1P29973 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNGA1P29973 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.03■□□□□ 0.64
CNGA1P29973 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNGA1P29973 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.03■□□□□ 0.64
CNGA1P29973 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.03■□□□□ 0.64
CNGA1P29973 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.03■□□□□ 0.64
CNGA1P29973 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms