Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CTGFP29279 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.64■□□□□ 0.57
CTGFP29279 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTGFP29279 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTGFP29279 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTGFP29279 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTGFP29279 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTGFP29279 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTGFP29279 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.64■□□□□ 0.57
CTGFP29279 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTGFP29279 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTGFP29279 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTGFP29279 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.64■□□□□ 0.57
CTGFP29279 AC093724.1-201ENST00000448659 1027 ntBASIC18.64■□□□□ 0.57
CTGFP29279 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTGFP29279 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTGFP29279 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
CTGFP29279 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.64■□□□□ 0.57
CTGFP29279 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTGFP29279 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.64■□□□□ 0.57
CTGFP29279 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTGFP29279 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTGFP29279 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTGFP29279 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTGFP29279 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTGFP29279 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.64■□□□□ 0.57
CTGFP29279 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.64■□□□□ 0.57
CTGFP29279 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTGFP29279 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTGFP29279 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTGFP29279 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CTGFP29279 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.63■□□□□ 0.57
CTGFP29279 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CTGFP29279 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTGFP29279 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
CTGFP29279 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CTGFP29279 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTGFP29279 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTGFP29279 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTGFP29279 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.63■□□□□ 0.57
CTGFP29279 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTGFP29279 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.63■□□□□ 0.57
CTGFP29279 HAUS4P1-201ENST00000406739 1145 ntBASIC18.63■□□□□ 0.57
CTGFP29279 AC004945.1-201ENST00000416738 983 ntBASIC18.63■□□□□ 0.57
CTGFP29279 BCYRN1-201ENST00000418539 200 ntBASIC18.63■□□□□ 0.57
CTGFP29279 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.63■□□□□ 0.57
CTGFP29279 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTGFP29279 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.63■□□□□ 0.57
CTGFP29279 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CTGFP29279 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.63■□□□□ 0.57
CTGFP29279 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.63■□□□□ 0.57
CTGFP29279 AC015936.2-201ENST00000593177 259 ntBASIC18.63■□□□□ 0.57
CTGFP29279 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTGFP29279 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.63■□□□□ 0.57
CTGFP29279 AC013467.2-201ENST00000605472 835 ntBASIC18.63■□□□□ 0.57
CTGFP29279 AC018665.1-201ENST00000622927 1362 ntBASIC18.63■□□□□ 0.57
CTGFP29279 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.63■□□□□ 0.57
CTGFP29279 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
CTGFP29279 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTGFP29279 AL589702.1-201ENST00000641229 1509 ntBASIC18.63■□□□□ 0.57
CTGFP29279 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTGFP29279 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTGFP29279 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTGFP29279 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTGFP29279 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTGFP29279 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTGFP29279 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTGFP29279 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTGFP29279 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTGFP29279 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTGFP29279 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTGFP29279 AC092933.1-201ENST00000393644 945 ntBASIC18.62■□□□□ 0.57
CTGFP29279 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.62■□□□□ 0.57
CTGFP29279 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTGFP29279 BOLA2P3-201ENST00000404566 256 ntBASIC18.62■□□□□ 0.57
CTGFP29279 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CTGFP29279 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.62■□□□□ 0.57
CTGFP29279 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.62■□□□□ 0.57
CTGFP29279 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTGFP29279 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.62■□□□□ 0.57
CTGFP29279 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.62■□□□□ 0.57
CTGFP29279 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTGFP29279 RN7SL219P-201ENST00000582872 296 ntBASIC18.62■□□□□ 0.57
CTGFP29279 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.62■□□□□ 0.57
CTGFP29279 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.62■□□□□ 0.57
CTGFP29279 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CTGFP29279 AC068587.10-201ENST00000641210 219 ntBASIC18.62■□□□□ 0.57
CTGFP29279 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTGFP29279 CLK3P2-201ENST00000427566 1453 ntBASIC18.62■□□□□ 0.57
CTGFP29279 PDIA3P1-201ENST00000471856 1510 ntBASIC18.62■□□□□ 0.57
CTGFP29279 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTGFP29279 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CTGFP29279 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTGFP29279 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTGFP29279 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTGFP29279 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTGFP29279 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
CTGFP29279 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTGFP29279 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTGFP29279 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms