Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC018695.7-201ENST00000624587 2492 ntBASIC14.18□□□□□ -0.14
COL8A2P25067 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL8A2P25067 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL8A2P25067 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL8A2P25067 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.18□□□□□ -0.14
COL8A2P25067 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL8A2P25067 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL8A2P25067 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.18□□□□□ -0.14
COL8A2P25067 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
COL8A2P25067 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.17□□□□□ -0.14
COL8A2P25067 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
COL8A2P25067 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
COL8A2P25067 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.17□□□□□ -0.14
COL8A2P25067 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.17□□□□□ -0.14
COL8A2P25067 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.17□□□□□ -0.14
COL8A2P25067 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
COL8A2P25067 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.17□□□□□ -0.14
COL8A2P25067 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.17□□□□□ -0.14
COL8A2P25067 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
COL8A2P25067 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.17□□□□□ -0.14
COL8A2P25067 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
COL8A2P25067 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.17□□□□□ -0.14
COL8A2P25067 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 TFAMP1-201ENST00000412727 736 ntBASIC14.17□□□□□ -0.14
COL8A2P25067 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.17□□□□□ -0.14
COL8A2P25067 HCG4-201ENST00000418983 998 ntBASIC14.17□□□□□ -0.14
COL8A2P25067 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
COL8A2P25067 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.17□□□□□ -0.14
COL8A2P25067 KRT8P48-201ENST00000515599 1220 ntBASIC14.17□□□□□ -0.14
COL8A2P25067 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.17□□□□□ -0.14
COL8A2P25067 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
COL8A2P25067 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
COL8A2P25067 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 AC022145.2-201ENST00000598203 171 ntBASIC14.17□□□□□ -0.14
COL8A2P25067 AC004835.2-201ENST00000603762 682 ntBASIC14.17□□□□□ -0.14
COL8A2P25067 AC027612.4-201ENST00000605371 583 ntBASIC14.17□□□□□ -0.14
COL8A2P25067 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 AC131009.4-201ENST00000624048 1740 ntBASIC14.17□□□□□ -0.14
COL8A2P25067 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.17□□□□□ -0.14
COL8A2P25067 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.17□□□□□ -0.14
COL8A2P25067 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
COL8A2P25067 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL8A2P25067 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
COL8A2P25067 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL8A2P25067 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
COL8A2P25067 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL8A2P25067 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
COL8A2P25067 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.16□□□□□ -0.14
COL8A2P25067 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL8A2P25067 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL8A2P25067 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL8A2P25067 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.16□□□□□ -0.14
COL8A2P25067 AL355306.1-201ENST00000415580 579 ntBASIC14.16□□□□□ -0.14
COL8A2P25067 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL8A2P25067 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL8A2P25067 SPDYE11-202ENST00000450699 704 ntBASIC14.16□□□□□ -0.14
COL8A2P25067 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.16□□□□□ -0.14
COL8A2P25067 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.16□□□□□ -0.14
COL8A2P25067 FAM86C2P-203ENST00000528684 1004 ntBASIC14.16□□□□□ -0.14
COL8A2P25067 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.16□□□□□ -0.14
COL8A2P25067 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.16□□□□□ -0.14
COL8A2P25067 AC087641.1-201ENST00000557561 1021 ntBASIC14.16□□□□□ -0.14
COL8A2P25067 SPDYE9P-201ENST00000570642 692 ntBASIC14.16□□□□□ -0.14
COL8A2P25067 AC091167.2-201ENST00000579581 588 ntBASIC14.16□□□□□ -0.14
COL8A2P25067 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.16□□□□□ -0.14
COL8A2P25067 AL009183.1-201ENST00000603760 355 ntBASIC14.16□□□□□ -0.14
COL8A2P25067 SPDYE10P-202ENST00000612005 668 ntBASIC14.16□□□□□ -0.14
COL8A2P25067 SPDYE8P-202ENST00000612377 668 ntBASIC14.16□□□□□ -0.14
COL8A2P25067 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL8A2P25067 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL8A2P25067 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL8A2P25067 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
COL8A2P25067 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
COL8A2P25067 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL8A2P25067 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL8A2P25067 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL8A2P25067 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL8A2P25067 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL8A2P25067 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL8A2P25067 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL8A2P25067 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms