Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MSR1P21757 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.87□□□□□ -0.03
MSR1P21757 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.87□□□□□ -0.03
MSR1P21757 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.87□□□□□ -0.03
MSR1P21757 AC008667.4-201ENST00000607370 168 ntBASIC14.87□□□□□ -0.03
MSR1P21757 AL031008.1-201ENST00000619963 541 ntBASIC14.87□□□□□ -0.03
MSR1P21757 AC005593.1-201ENST00000624894 515 ntBASIC14.87□□□□□ -0.03
MSR1P21757 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
MSR1P21757 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
MSR1P21757 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.87□□□□□ -0.03
MSR1P21757 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MSR1P21757 AC006277.1-201ENST00000624348 1610 ntBASIC14.87□□□□□ -0.03
MSR1P21757 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.87□□□□□ -0.03
MSR1P21757 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.87□□□□□ -0.03
MSR1P21757 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MSR1P21757 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
MSR1P21757 AL118508.1-201ENST00000613502 2345 ntBASIC14.87□□□□□ -0.03
MSR1P21757 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.87□□□□□ -0.03
MSR1P21757 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MSR1P21757 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MSR1P21757 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MSR1P21757 HLA-A-202ENST00000376806 1854 ntBASIC14.86□□□□□ -0.03
MSR1P21757 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.86□□□□□ -0.03
MSR1P21757 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.86□□□□□ -0.03
MSR1P21757 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
MSR1P21757 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.86□□□□□ -0.03
MSR1P21757 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
MSR1P21757 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.86□□□□□ -0.03
MSR1P21757 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
MSR1P21757 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.86□□□□□ -0.03
MSR1P21757 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
MSR1P21757 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.86□□□□□ -0.03
MSR1P21757 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
MSR1P21757 HLA-J-202ENST00000469281 1241 ntBASIC14.86□□□□□ -0.03
MSR1P21757 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.86□□□□□ -0.03
MSR1P21757 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.86□□□□□ -0.03
MSR1P21757 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.86□□□□□ -0.03
MSR1P21757 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.86□□□□□ -0.03
MSR1P21757 AC091167.2-201ENST00000579581 588 ntBASIC14.86□□□□□ -0.03
MSR1P21757 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
MSR1P21757 AL773604.1-201ENST00000617417 272 ntBASIC14.86□□□□□ -0.03
MSR1P21757 REXO1L3P-201ENST00000622202 1288 ntBASIC14.86□□□□□ -0.03
MSR1P21757 FAM215A-202ENST00000632077 792 ntBASIC14.86□□□□□ -0.03
MSR1P21757 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.86□□□□□ -0.03
MSR1P21757 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.86□□□□□ -0.03
MSR1P21757 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.86□□□□□ -0.03
MSR1P21757 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MSR1P21757 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.85□□□□□ -0.03
MSR1P21757 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MSR1P21757 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MSR1P21757 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MSR1P21757 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MSR1P21757 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.85□□□□□ -0.03
MSR1P21757 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.85□□□□□ -0.03
MSR1P21757 AP002414.3-201ENST00000589352 1468 ntBASIC14.85□□□□□ -0.03
MSR1P21757 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MSR1P21757 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MSR1P21757 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.85□□□□□ -0.03
MSR1P21757 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.85□□□□□ -0.03
MSR1P21757 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.85□□□□□ -0.03
MSR1P21757 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MSR1P21757 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MSR1P21757 IGHV3-65-201ENST00000523210 341 ntBASIC14.85□□□□□ -0.03
MSR1P21757 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.85□□□□□ -0.03
MSR1P21757 AP002469.2-201ENST00000531724 424 ntBASIC14.85□□□□□ -0.03
MSR1P21757 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.85□□□□□ -0.03
MSR1P21757 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.85□□□□□ -0.03
MSR1P21757 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.85□□□□□ -0.03
MSR1P21757 AC148477.8-201ENST00000624298 468 ntBASIC14.85□□□□□ -0.03
MSR1P21757 AL139011.1-202ENST00000642063 584 ntBASIC14.85□□□□□ -0.03
MSR1P21757 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.85□□□□□ -0.03
MSR1P21757 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MSR1P21757 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MSR1P21757 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
MSR1P21757 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MSR1P21757 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.85□□□□□ -0.03
MSR1P21757 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MSR1P21757 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.85□□□□□ -0.03
MSR1P21757 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms