Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.31■□□□□ 0.2
SP9P0CG40 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SP9P0CG40 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SP9P0CG40 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SP9P0CG40 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SP9P0CG40 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SP9P0CG40 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SP9P0CG40 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.31■□□□□ 0.2
SP9P0CG40 FO681548.1-201ENST00000455617 1132 ntBASIC16.31■□□□□ 0.2
SP9P0CG40 RHOQP1-201ENST00000555758 579 ntBASIC16.31■□□□□ 0.2
SP9P0CG40 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.31■□□□□ 0.2
SP9P0CG40 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.31■□□□□ 0.2
SP9P0CG40 RN7SL190P-201ENST00000582519 257 ntBASIC16.31■□□□□ 0.2
SP9P0CG40 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SP9P0CG40 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.31■□□□□ 0.2
SP9P0CG40 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SP9P0CG40 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SP9P0CG40 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SP9P0CG40 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SP9P0CG40 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SP9P0CG40 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SP9P0CG40 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SP9P0CG40 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SP9P0CG40 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SP9P0CG40 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.3■□□□□ 0.2
SP9P0CG40 FRMD8P1-201ENST00000440433 1524 ntBASIC16.3■□□□□ 0.2
SP9P0CG40 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SP9P0CG40 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SP9P0CG40 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SP9P0CG40 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SP9P0CG40 AC005229.1-201ENST00000392885 409 ntBASIC16.3■□□□□ 0.2
SP9P0CG40 MIR1247-201ENST00000408206 136 ntBASIC16.3■□□□□ 0.2
SP9P0CG40 GPAA1P2-201ENST00000417923 928 ntBASIC16.3■□□□□ 0.2
SP9P0CG40 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.3■□□□□ 0.2
SP9P0CG40 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.3■□□□□ 0.2
SP9P0CG40 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.3■□□□□ 0.2
SP9P0CG40 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SP9P0CG40 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.3■□□□□ 0.2
SP9P0CG40 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.3■□□□□ 0.2
SP9P0CG40 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.3■□□□□ 0.2
SP9P0CG40 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.3■□□□□ 0.2
SP9P0CG40 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.3■□□□□ 0.2
SP9P0CG40 AC243960.2-201ENST00000600996 747 ntBASIC16.3■□□□□ 0.2
SP9P0CG40 AL022328.1-201ENST00000610050 478 ntBASIC16.3■□□□□ 0.2
SP9P0CG40 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SP9P0CG40 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.3■□□□□ 0.2
SP9P0CG40 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SP9P0CG40 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SP9P0CG40 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.3■□□□□ 0.2
SP9P0CG40 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SP9P0CG40 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SP9P0CG40 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.3■□□□□ 0.2
SP9P0CG40 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SP9P0CG40 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP9P0CG40 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SP9P0CG40 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.29■□□□□ 0.2
SP9P0CG40 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.29■□□□□ 0.2
SP9P0CG40 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP9P0CG40 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.29■□□□□ 0.2
SP9P0CG40 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP9P0CG40 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SP9P0CG40 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.29■□□□□ 0.2
SP9P0CG40 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP9P0CG40 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP9P0CG40 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP9P0CG40 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SP9P0CG40 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP9P0CG40 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SP9P0CG40 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.29■□□□□ 0.2
SP9P0CG40 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.29■□□□□ 0.2
SP9P0CG40 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.29■□□□□ 0.2
SP9P0CG40 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.29■□□□□ 0.2
SP9P0CG40 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SP9P0CG40 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.29■□□□□ 0.2
SP9P0CG40 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.29■□□□□ 0.2
SP9P0CG40 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.29■□□□□ 0.2
SP9P0CG40 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.29■□□□□ 0.2
SP9P0CG40 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SP9P0CG40 AC074044.1-201ENST00000609673 707 ntBASIC16.29■□□□□ 0.2
SP9P0CG40 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.29■□□□□ 0.2
SP9P0CG40 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.29■□□□□ 0.2
SP9P0CG40 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.29■□□□□ 0.2
SP9P0CG40 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SP9P0CG40 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SP9P0CG40 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.29■□□□□ 0.2
SP9P0CG40 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SP9P0CG40 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP9P0CG40 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.29■□□□□ 0.2
SP9P0CG40 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP9P0CG40 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP9P0CG40 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP9P0CG40 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP9P0CG40 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP9P0CG40 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.29■□□□□ 0.2
SP9P0CG40 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP9P0CG40 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP9P0CG40 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SP9P0CG40 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SP9P0CG40 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SP9P0CG40 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms