Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 AC074386.1-202ENST00000463561 864 ntBASIC18.38■□□□□ 0.53
CLTAP09496 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.38■□□□□ 0.53
CLTAP09496 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.38■□□□□ 0.53
CLTAP09496 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.38■□□□□ 0.53
CLTAP09496 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.38■□□□□ 0.53
CLTAP09496 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.38■□□□□ 0.53
CLTAP09496 MIR4515-201ENST00000584082 81 ntBASIC18.38■□□□□ 0.53
CLTAP09496 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.38■□□□□ 0.53
CLTAP09496 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.38■□□□□ 0.53
CLTAP09496 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.38■□□□□ 0.53
CLTAP09496 TUBB8P12-201ENST00000308911 1335 ntBASIC18.38■□□□□ 0.53
CLTAP09496 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CLTAP09496 TUBB7P-202ENST00000428444 1305 ntBASIC18.38■□□□□ 0.53
CLTAP09496 TUBB8P7-204ENST00000567960 1332 ntBASIC18.38■□□□□ 0.53
CLTAP09496 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLTAP09496 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLTAP09496 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLTAP09496 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLTAP09496 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.38■□□□□ 0.53
CLTAP09496 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.38■□□□□ 0.53
CLTAP09496 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLTAP09496 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLTAP09496 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.38■□□□□ 0.53
CLTAP09496 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLTAP09496 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLTAP09496 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CLTAP09496 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.37■□□□□ 0.53
CLTAP09496 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLTAP09496 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLTAP09496 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CLTAP09496 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.37■□□□□ 0.53
CLTAP09496 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLTAP09496 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.37■□□□□ 0.53
CLTAP09496 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLTAP09496 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLTAP09496 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.37■□□□□ 0.53
CLTAP09496 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.37■□□□□ 0.53
CLTAP09496 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLTAP09496 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.37■□□□□ 0.53
CLTAP09496 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLTAP09496 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CLTAP09496 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLTAP09496 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.37■□□□□ 0.53
CLTAP09496 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLTAP09496 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLTAP09496 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLTAP09496 AL121761.2-201ENST00000598007 1648 ntBASIC18.37■□□□□ 0.53
CLTAP09496 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLTAP09496 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.37■□□□□ 0.53
CLTAP09496 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLTAP09496 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLTAP09496 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLTAP09496 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLTAP09496 AC092068.3-201ENST00000587894 2016 ntBASIC18.37■□□□□ 0.53
CLTAP09496 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CLTAP09496 AL118508.1-201ENST00000613502 2345 ntBASIC18.37■□□□□ 0.53
CLTAP09496 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
CLTAP09496 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.37■□□□□ 0.53
CLTAP09496 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLTAP09496 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLTAP09496 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLTAP09496 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLTAP09496 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLTAP09496 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLTAP09496 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLTAP09496 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLTAP09496 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLTAP09496 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLTAP09496 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLTAP09496 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLTAP09496 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLTAP09496 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.36■□□□□ 0.53
CLTAP09496 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.36■□□□□ 0.53
CLTAP09496 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.36■□□□□ 0.53
CLTAP09496 UPF3AP3-201ENST00000420996 769 ntBASIC18.36■□□□□ 0.53
CLTAP09496 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.36■□□□□ 0.53
CLTAP09496 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CLTAP09496 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CLTAP09496 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.36■□□□□ 0.53
CLTAP09496 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CLTAP09496 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.36■□□□□ 0.53
CLTAP09496 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLTAP09496 AL031432.2-201ENST00000566714 459 ntBASIC18.36■□□□□ 0.53
CLTAP09496 AL928711.1-201ENST00000570165 459 ntBASIC18.36■□□□□ 0.53
CLTAP09496 MIR3687-2-201ENST00000577708 61 ntBASIC18.36■□□□□ 0.53
CLTAP09496 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.36■□□□□ 0.53
CLTAP09496 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.36■□□□□ 0.53
CLTAP09496 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.36■□□□□ 0.53
CLTAP09496 MIR3687-1-201ENST00000614492 61 ntBASIC18.36■□□□□ 0.53
CLTAP09496 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLTAP09496 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLTAP09496 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CLTAP09496 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CLTAP09496 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CLTAP09496 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLTAP09496 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLTAP09496 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms