Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CHRNA1P02708 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA1P02708 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA1P02708 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA1P02708 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.12■□□□□ 0.49
CHRNA1P02708 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA1P02708 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA1P02708 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.12■□□□□ 0.49
CHRNA1P02708 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CHRNA1P02708 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA1P02708 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA1P02708 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA1P02708 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA1P02708 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA1P02708 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA1P02708 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.12■□□□□ 0.49
CHRNA1P02708 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.12■□□□□ 0.49
CHRNA1P02708 BANF1P1-201ENST00000553684 263 ntBASIC18.12■□□□□ 0.49
CHRNA1P02708 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.12■□□□□ 0.49
CHRNA1P02708 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA1P02708 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.12■□□□□ 0.49
CHRNA1P02708 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CHRNA1P02708 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.12■□□□□ 0.49
CHRNA1P02708 AC009118.2-201ENST00000613275 655 ntBASIC18.12■□□□□ 0.49
CHRNA1P02708 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA1P02708 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHRNA1P02708 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA1P02708 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHRNA1P02708 AL035456.1-201ENST00000456064 1369 ntBASIC18.12■□□□□ 0.49
CHRNA1P02708 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA1P02708 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHRNA1P02708 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA1P02708 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.12■□□□□ 0.49
CHRNA1P02708 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA1P02708 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA1P02708 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA1P02708 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHRNA1P02708 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.12■□□□□ 0.49
CHRNA1P02708 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA1P02708 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNA1P02708 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA1P02708 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA1P02708 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.11■□□□□ 0.49
CHRNA1P02708 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA1P02708 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CHRNA1P02708 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA1P02708 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.11■□□□□ 0.49
CHRNA1P02708 PIN1P1-201ENST00000412108 996 ntBASIC18.11■□□□□ 0.49
CHRNA1P02708 RPL37AP1-201ENST00000412502 279 ntBASIC18.11■□□□□ 0.49
CHRNA1P02708 AL353705.2-201ENST00000428243 662 ntBASIC18.11■□□□□ 0.49
CHRNA1P02708 AC009477.1-201ENST00000452936 217 ntBASIC18.11■□□□□ 0.49
CHRNA1P02708 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.11■□□□□ 0.49
CHRNA1P02708 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.11■□□□□ 0.49
CHRNA1P02708 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CHRNA1P02708 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.11■□□□□ 0.49
CHRNA1P02708 AC009407.1-201ENST00000568958 598 ntBASIC18.11■□□□□ 0.49
CHRNA1P02708 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.11■□□□□ 0.49
CHRNA1P02708 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.11■□□□□ 0.49
CHRNA1P02708 SPDYE22P-201ENST00000582158 798 ntBASIC18.11■□□□□ 0.49
CHRNA1P02708 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA1P02708 RN7SL828P-201ENST00000607615 303 ntBASIC18.11■□□□□ 0.49
CHRNA1P02708 TEX28P1-201ENST00000613479 1221 ntBASIC18.11■□□□□ 0.49
CHRNA1P02708 AL662799.1-202ENST00000614205 422 ntBASIC18.11■□□□□ 0.49
CHRNA1P02708 TEX28P2-201ENST00000617764 1221 ntBASIC18.11■□□□□ 0.49
CHRNA1P02708 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA1P02708 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA1P02708 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.11■□□□□ 0.49
CHRNA1P02708 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA1P02708 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA1P02708 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA1P02708 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CHRNA1P02708 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.11■□□□□ 0.49
CHRNA1P02708 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CHRNA1P02708 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA1P02708 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.11■□□□□ 0.49
CHRNA1P02708 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CHRNA1P02708 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CHRNA1P02708 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CHRNA1P02708 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA1P02708 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA1P02708 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA1P02708 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.1■□□□□ 0.49
CHRNA1P02708 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA1P02708 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRNA1P02708 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.1■□□□□ 0.49
CHRNA1P02708 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA1P02708 SPTLC1P1-201ENST00000447199 261 ntBASIC18.1■□□□□ 0.49
CHRNA1P02708 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA1P02708 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA1P02708 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA1P02708 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA1P02708 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA1P02708 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRNA1P02708 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms