Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.35□□□□□ -0.27
IFNA1P01562 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.35□□□□□ -0.27
IFNA1P01562 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
IFNA1P01562 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
IFNA1P01562 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
IFNA1P01562 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
IFNA1P01562 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.34□□□□□ -0.27
IFNA1P01562 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.34□□□□□ -0.27
IFNA1P01562 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
IFNA1P01562 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
IFNA1P01562 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
IFNA1P01562 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.34□□□□□ -0.27
IFNA1P01562 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 AC026271.2-201ENST00000428091 497 ntBASIC13.34□□□□□ -0.27
IFNA1P01562 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC13.34□□□□□ -0.27
IFNA1P01562 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
IFNA1P01562 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 MIR5787-201ENST00000611784 55 ntBASIC13.34□□□□□ -0.27
IFNA1P01562 AC133041.1-202ENST00000642053 222 ntBASIC13.34□□□□□ -0.27
IFNA1P01562 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
IFNA1P01562 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
IFNA1P01562 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.34□□□□□ -0.27
IFNA1P01562 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.34□□□□□ -0.27
IFNA1P01562 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.34□□□□□ -0.27
IFNA1P01562 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IFNA1P01562 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.34□□□□□ -0.27
IFNA1P01562 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
IFNA1P01562 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.33□□□□□ -0.27
IFNA1P01562 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
IFNA1P01562 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
IFNA1P01562 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
IFNA1P01562 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
IFNA1P01562 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IFNA1P01562 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.33□□□□□ -0.28
IFNA1P01562 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.33□□□□□ -0.28
IFNA1P01562 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
IFNA1P01562 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.33□□□□□ -0.28
IFNA1P01562 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
IFNA1P01562 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.33□□□□□ -0.28
IFNA1P01562 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
IFNA1P01562 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
IFNA1P01562 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
IFNA1P01562 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.33□□□□□ -0.28
IFNA1P01562 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.33□□□□□ -0.28
IFNA1P01562 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
IFNA1P01562 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.33□□□□□ -0.28
IFNA1P01562 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.33□□□□□ -0.28
IFNA1P01562 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
IFNA1P01562 MESTP1-201ENST00000404287 994 ntBASIC13.33□□□□□ -0.28
IFNA1P01562 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.33□□□□□ -0.28
IFNA1P01562 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC13.33□□□□□ -0.28
IFNA1P01562 AC097488.1-201ENST00000507834 756 ntBASIC13.33□□□□□ -0.28
IFNA1P01562 AC112698.1-201ENST00000510299 916 ntBASIC13.33□□□□□ -0.28
IFNA1P01562 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
IFNA1P01562 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC13.33□□□□□ -0.28
IFNA1P01562 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC13.33□□□□□ -0.28
IFNA1P01562 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.33□□□□□ -0.28
IFNA1P01562 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
IFNA1P01562 AL137784.2-201ENST00000607332 1000 ntBASIC13.33□□□□□ -0.28
IFNA1P01562 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
IFNA1P01562 AC009154.2-201ENST00000621177 724 ntBASIC13.33□□□□□ -0.28
IFNA1P01562 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
IFNA1P01562 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
IFNA1P01562 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
IFNA1P01562 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.33□□□□□ -0.28
IFNA1P01562 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
IFNA1P01562 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
IFNA1P01562 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
IFNA1P01562 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.33□□□□□ -0.28
IFNA1P01562 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IFNA1P01562 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IFNA1P01562 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.33□□□□□ -0.28
IFNA1P01562 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.33□□□□□ -0.28
IFNA1P01562 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.33□□□□□ -0.28
IFNA1P01562 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms