Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ALDH1A1P00352 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ALDH1A1P00352 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ALDH1A1P00352 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ALDH1A1P00352 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ALDH1A1P00352 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ALDH1A1P00352 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.93■□□□□ 0.62
ALDH1A1P00352 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
ALDH1A1P00352 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.93■□□□□ 0.62
ALDH1A1P00352 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
ALDH1A1P00352 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.93■□□□□ 0.62
ALDH1A1P00352 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ALDH1A1P00352 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.93■□□□□ 0.62
ALDH1A1P00352 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.93■□□□□ 0.62
ALDH1A1P00352 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ALDH1A1P00352 KLF2P4-201ENST00000451959 1225 ntBASIC18.93■□□□□ 0.62
ALDH1A1P00352 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ALDH1A1P00352 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.93■□□□□ 0.62
ALDH1A1P00352 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.93■□□□□ 0.62
ALDH1A1P00352 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.93■□□□□ 0.62
ALDH1A1P00352 RNA5SP412-201ENST00000516234 123 ntBASIC18.93■□□□□ 0.62
ALDH1A1P00352 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.93■□□□□ 0.62
ALDH1A1P00352 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ALDH1A1P00352 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ALDH1A1P00352 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ALDH1A1P00352 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
ALDH1A1P00352 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.93■□□□□ 0.62
ALDH1A1P00352 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ALDH1A1P00352 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.92■□□□□ 0.62
ALDH1A1P00352 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALDH1A1P00352 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALDH1A1P00352 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ALDH1A1P00352 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALDH1A1P00352 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALDH1A1P00352 NOC2LP1-202ENST00000452600 2235 ntBASIC18.92■□□□□ 0.62
ALDH1A1P00352 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALDH1A1P00352 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALDH1A1P00352 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ALDH1A1P00352 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALDH1A1P00352 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALDH1A1P00352 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.92■□□□□ 0.62
ALDH1A1P00352 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALDH1A1P00352 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ALDH1A1P00352 AC092506.1-202ENST00000401022 528 ntBASIC18.92■□□□□ 0.62
ALDH1A1P00352 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.92■□□□□ 0.62
ALDH1A1P00352 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.92■□□□□ 0.62
ALDH1A1P00352 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ALDH1A1P00352 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.92■□□□□ 0.62
ALDH1A1P00352 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.92■□□□□ 0.62
ALDH1A1P00352 AL589987.1-201ENST00000453380 819 ntBASIC18.92■□□□□ 0.62
ALDH1A1P00352 CTBP2P5-201ENST00000454986 1264 ntBASIC18.92■□□□□ 0.62
ALDH1A1P00352 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC18.92■□□□□ 0.62
ALDH1A1P00352 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALDH1A1P00352 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ALDH1A1P00352 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.92■□□□□ 0.62
ALDH1A1P00352 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ALDH1A1P00352 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALDH1A1P00352 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALDH1A1P00352 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ALDH1A1P00352 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALDH1A1P00352 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALDH1A1P00352 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.92■□□□□ 0.62
ALDH1A1P00352 AC018665.1-201ENST00000622927 1362 ntBASIC18.92■□□□□ 0.62
ALDH1A1P00352 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALDH1A1P00352 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ALDH1A1P00352 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ALDH1A1P00352 USP32P1-208ENST00000506594 1164 ntBASIC18.91■□□□□ 0.62
ALDH1A1P00352 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ALDH1A1P00352 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALDH1A1P00352 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 TIMM17BP1-201ENST00000545713 516 ntBASIC18.91■□□□□ 0.62
ALDH1A1P00352 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.91■□□□□ 0.62
ALDH1A1P00352 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 AC244093.1-201ENST00000610837 814 ntBASIC18.91■□□□□ 0.62
ALDH1A1P00352 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ALDH1A1P00352 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALDH1A1P00352 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALDH1A1P00352 AC133963.1-201ENST00000504166 1679 ntBASIC18.91■□□□□ 0.62
ALDH1A1P00352 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 AC093525.9-201ENST00000624961 1746 ntBASIC18.91■□□□□ 0.62
ALDH1A1P00352 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALDH1A1P00352 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 AC016396.2-201ENST00000562575 1417 ntBASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms