Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GGPS1O95749 TUBB8P12-201ENST00000308911 1335 ntBASIC18.79■□□□□ 0.6
GGPS1O95749 TUBB7P-202ENST00000428444 1305 ntBASIC18.79■□□□□ 0.6
GGPS1O95749 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.79■□□□□ 0.6
GGPS1O95749 TUBB8P7-204ENST00000567960 1332 ntBASIC18.79■□□□□ 0.6
GGPS1O95749 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GGPS1O95749 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.79■□□□□ 0.6
GGPS1O95749 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GGPS1O95749 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.79■□□□□ 0.6
GGPS1O95749 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GGPS1O95749 LINC00895-201ENST00000629028 1637 ntBASIC18.79■□□□□ 0.6
GGPS1O95749 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
GGPS1O95749 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
GGPS1O95749 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GGPS1O95749 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GGPS1O95749 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GGPS1O95749 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GGPS1O95749 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.79■□□□□ 0.6
GGPS1O95749 SPDYE14P-201ENST00000442619 822 ntBASIC18.79■□□□□ 0.6
GGPS1O95749 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.79■□□□□ 0.6
GGPS1O95749 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
GGPS1O95749 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GGPS1O95749 AC026150.2-201ENST00000564693 1156 ntBASIC18.79■□□□□ 0.6
GGPS1O95749 AP000842.3-202ENST00000569238 1080 ntBASIC18.79■□□□□ 0.6
GGPS1O95749 MIR3197-201ENST00000582241 73 ntBASIC18.79■□□□□ 0.6
GGPS1O95749 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.79■□□□□ 0.6
GGPS1O95749 AC092364.2-202ENST00000597012 1073 ntBASIC18.79■□□□□ 0.6
GGPS1O95749 AC021097.1-201ENST00000607902 574 ntBASIC18.79■□□□□ 0.6
GGPS1O95749 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
GGPS1O95749 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GGPS1O95749 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GGPS1O95749 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GGPS1O95749 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
GGPS1O95749 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
GGPS1O95749 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.79■□□□□ 0.6
GGPS1O95749 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GGPS1O95749 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.79■□□□□ 0.6
GGPS1O95749 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
GGPS1O95749 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GGPS1O95749 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GGPS1O95749 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GGPS1O95749 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
GGPS1O95749 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
GGPS1O95749 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
GGPS1O95749 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.78■□□□□ 0.6
GGPS1O95749 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
GGPS1O95749 AC092068.3-201ENST00000587894 2016 ntBASIC18.78■□□□□ 0.6
GGPS1O95749 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GGPS1O95749 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
GGPS1O95749 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
GGPS1O95749 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GGPS1O95749 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
GGPS1O95749 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GGPS1O95749 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GGPS1O95749 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.78■□□□□ 0.6
GGPS1O95749 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GGPS1O95749 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.78■□□□□ 0.6
GGPS1O95749 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.78■□□□□ 0.6
GGPS1O95749 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GGPS1O95749 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
GGPS1O95749 AL138918.1-201ENST00000568306 659 ntBASIC18.78■□□□□ 0.6
GGPS1O95749 AC051619.7-201ENST00000568314 623 ntBASIC18.78■□□□□ 0.6
GGPS1O95749 AL390955.2-201ENST00000603032 514 ntBASIC18.78■□□□□ 0.6
GGPS1O95749 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
GGPS1O95749 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.78■□□□□ 0.6
GGPS1O95749 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.78■□□□□ 0.6
GGPS1O95749 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GGPS1O95749 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
GGPS1O95749 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.78■□□□□ 0.6
GGPS1O95749 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.78■□□□□ 0.6
GGPS1O95749 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
GGPS1O95749 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GGPS1O95749 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
GGPS1O95749 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
GGPS1O95749 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.78■□□□□ 0.6
GGPS1O95749 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GGPS1O95749 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
GGPS1O95749 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
GGPS1O95749 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
GGPS1O95749 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
GGPS1O95749 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GGPS1O95749 TUBB3P1-201ENST00000405796 1332 ntBASIC18.77■□□□□ 0.6
GGPS1O95749 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GGPS1O95749 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
GGPS1O95749 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.77■□□□□ 0.6
GGPS1O95749 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GGPS1O95749 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GGPS1O95749 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.77■□□□□ 0.6
GGPS1O95749 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
GGPS1O95749 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.77■□□□□ 0.6
GGPS1O95749 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GGPS1O95749 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GGPS1O95749 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.77■□□□□ 0.6
GGPS1O95749 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GGPS1O95749 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GGPS1O95749 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
GGPS1O95749 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GGPS1O95749 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GGPS1O95749 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.77■□□□□ 0.6
GGPS1O95749 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms