Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ABCA1O95477 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
ABCA1O95477 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.11□□□□□ -0.15
ABCA1O95477 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
ABCA1O95477 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCA1O95477 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCA1O95477 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.11□□□□□ -0.15
ABCA1O95477 GPS2P2-201ENST00000430745 888 ntBASIC14.11□□□□□ -0.15
ABCA1O95477 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.11□□□□□ -0.15
ABCA1O95477 INGX-202ENST00000489074 768 ntBASIC14.11□□□□□ -0.15
ABCA1O95477 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.11□□□□□ -0.15
ABCA1O95477 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ABCA1O95477 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.11□□□□□ -0.15
ABCA1O95477 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.11□□□□□ -0.15
ABCA1O95477 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.11□□□□□ -0.15
ABCA1O95477 AL008721.1-201ENST00000609964 604 ntBASIC14.11□□□□□ -0.15
ABCA1O95477 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
ABCA1O95477 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCA1O95477 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.11□□□□□ -0.15
ABCA1O95477 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCA1O95477 AL355312.1-201ENST00000407115 2176 ntBASIC14.11□□□□□ -0.15
ABCA1O95477 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ABCA1O95477 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ABCA1O95477 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCA1O95477 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.11□□□□□ -0.15
ABCA1O95477 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCA1O95477 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
ABCA1O95477 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
ABCA1O95477 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCA1O95477 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ABCA1O95477 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.11□□□□□ -0.15
ABCA1O95477 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.11□□□□□ -0.15
ABCA1O95477 SLC25A39P2-201ENST00000537614 270 ntBASIC14.11□□□□□ -0.15
ABCA1O95477 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.11□□□□□ -0.15
ABCA1O95477 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCA1O95477 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCA1O95477 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ABCA1O95477 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ABCA1O95477 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.1□□□□□ -0.15
ABCA1O95477 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ABCA1O95477 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
ABCA1O95477 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.1□□□□□ -0.15
ABCA1O95477 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCA1O95477 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCA1O95477 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCA1O95477 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCA1O95477 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.1□□□□□ -0.15
ABCA1O95477 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.1□□□□□ -0.15
ABCA1O95477 AC092580.3-201ENST00000430932 139 ntBASIC14.1□□□□□ -0.15
ABCA1O95477 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.1□□□□□ -0.15
ABCA1O95477 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.1□□□□□ -0.15
ABCA1O95477 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.1□□□□□ -0.15
ABCA1O95477 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCA1O95477 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ABCA1O95477 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.1□□□□□ -0.15
ABCA1O95477 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ABCA1O95477 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.1□□□□□ -0.15
ABCA1O95477 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ABCA1O95477 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.1□□□□□ -0.15
ABCA1O95477 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCA1O95477 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.1□□□□□ -0.15
ABCA1O95477 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ABCA1O95477 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.1□□□□□ -0.15
ABCA1O95477 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
ABCA1O95477 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCA1O95477 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.1□□□□□ -0.15
ABCA1O95477 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ABCA1O95477 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ABCA1O95477 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCA1O95477 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ABCA1O95477 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.1□□□□□ -0.15
ABCA1O95477 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.1□□□□□ -0.15
ABCA1O95477 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.1□□□□□ -0.15
ABCA1O95477 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
ABCA1O95477 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.1□□□□□ -0.15
ABCA1O95477 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.1□□□□□ -0.15
ABCA1O95477 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.1□□□□□ -0.15
ABCA1O95477 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.1□□□□□ -0.15
ABCA1O95477 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ABCA1O95477 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCA1O95477 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ABCA1O95477 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ABCA1O95477 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCA1O95477 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCA1O95477 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCA1O95477 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.09□□□□□ -0.15
ABCA1O95477 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCA1O95477 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ABCA1O95477 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ABCA1O95477 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
ABCA1O95477 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.09□□□□□ -0.15
ABCA1O95477 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.09□□□□□ -0.15
ABCA1O95477 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.09□□□□□ -0.15
ABCA1O95477 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCA1O95477 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
ABCA1O95477 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ABCA1O95477 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
ABCA1O95477 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCA1O95477 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCA1O95477 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms