Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LTN1O94822 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LTN1O94822 AC141586.5-201ENST00000624546 2050 ntBASIC21.91■■□□□ 1.1
LTN1O94822 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC21.91■■□□□ 1.1
LTN1O94822 HLA-V-201ENST00000429037 534 ntBASIC21.91■■□□□ 1.1
LTN1O94822 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC21.91■■□□□ 1.1
LTN1O94822 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC21.91■■□□□ 1.1
LTN1O94822 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.91■■□□□ 1.1
LTN1O94822 AC020765.3-201ENST00000613051 740 ntBASIC21.91■■□□□ 1.1
LTN1O94822 AMT-206ENST00000458307 1860 ntTSL 2 BASIC21.91■■□□□ 1.1
LTN1O94822 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LTN1O94822 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LTN1O94822 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
LTN1O94822 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LTN1O94822 AL589702.1-201ENST00000641229 1509 ntBASIC21.9■■□□□ 1.1
LTN1O94822 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LTN1O94822 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LTN1O94822 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LTN1O94822 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LTN1O94822 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LTN1O94822 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LTN1O94822 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC21.9■■□□□ 1.1
LTN1O94822 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
LTN1O94822 FTH1-202ENST00000526640 786 ntTSL 2 BASIC21.9■■□□□ 1.1
LTN1O94822 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC21.9■■□□□ 1.1
LTN1O94822 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LTN1O94822 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LTN1O94822 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC21.9■■□□□ 1.1
LTN1O94822 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LTN1O94822 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LTN1O94822 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LTN1O94822 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LTN1O94822 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LTN1O94822 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LTN1O94822 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LTN1O94822 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
LTN1O94822 AL603756.1-201ENST00000606511 2163 ntBASIC21.9■■□□□ 1.1
LTN1O94822 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LTN1O94822 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
LTN1O94822 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LTN1O94822 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC21.89■■□□□ 1.1
LTN1O94822 INE1-201ENST00000456273 945 ntBASIC21.89■■□□□ 1.1
LTN1O94822 AC119751.2-201ENST00000504529 210 ntBASIC21.89■■□□□ 1.1
LTN1O94822 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC21.89■■□□□ 1.1
LTN1O94822 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC21.89■■□□□ 1.1
LTN1O94822 TPRX2P-201ENST00000535362 881 ntBASIC21.89■■□□□ 1.1
LTN1O94822 SRD5A3P1-201ENST00000603021 949 ntBASIC21.89■■□□□ 1.1
LTN1O94822 AL008721.1-201ENST00000609964 604 ntBASIC21.89■■□□□ 1.1
LTN1O94822 AC004461.2-201ENST00000629517 803 ntBASIC21.89■■□□□ 1.1
LTN1O94822 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.89■■□□□ 1.1
LTN1O94822 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LTN1O94822 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LTN1O94822 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LTN1O94822 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
LTN1O94822 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.89■■□□□ 1.09
LTN1O94822 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LTN1O94822 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
LTN1O94822 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
LTN1O94822 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LTN1O94822 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LTN1O94822 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
LTN1O94822 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC21.89■■□□□ 1.09
LTN1O94822 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC21.89■■□□□ 1.09
LTN1O94822 AC098850.1-201ENST00000419919 790 ntBASIC21.89■■□□□ 1.09
LTN1O94822 AL353779.1-201ENST00000434793 351 ntBASIC21.89■■□□□ 1.09
LTN1O94822 SERBP1P3-201ENST00000459980 809 ntBASIC21.89■■□□□ 1.09
LTN1O94822 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC21.89■■□□□ 1.09
LTN1O94822 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC21.89■■□□□ 1.09
LTN1O94822 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LTN1O94822 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC21.89■■□□□ 1.09
LTN1O94822 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC21.88■■□□□ 1.09
LTN1O94822 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.88■■□□□ 1.09
LTN1O94822 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.88■■□□□ 1.09
LTN1O94822 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
LTN1O94822 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
LTN1O94822 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
LTN1O94822 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC21.88■■□□□ 1.09
LTN1O94822 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC21.88■■□□□ 1.09
LTN1O94822 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC21.88■■□□□ 1.09
LTN1O94822 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
LTN1O94822 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LTN1O94822 AC092337.1-201ENST00000568699 1129 ntBASIC21.88■■□□□ 1.09
LTN1O94822 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC21.88■■□□□ 1.09
LTN1O94822 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC21.88■■□□□ 1.09
LTN1O94822 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.88■■□□□ 1.09
LTN1O94822 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
LTN1O94822 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
LTN1O94822 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC21.88■■□□□ 1.09
LTN1O94822 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LTN1O94822 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LTN1O94822 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC21.88■■□□□ 1.09
LTN1O94822 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LTN1O94822 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
LTN1O94822 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.88■■□□□ 1.09
LTN1O94822 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC21.88■■□□□ 1.09
LTN1O94822 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LTN1O94822 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LTN1O94822 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LTN1O94822 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
LTN1O94822 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms