Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1BO75841 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
UPK1BO75841 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
UPK1BO75841 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.66□□□□□ -0.06
UPK1BO75841 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1BO75841 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.66□□□□□ -0.06
UPK1BO75841 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 AC232323.1-201ENST00000540724 2099 ntBASIC14.65□□□□□ -0.06
UPK1BO75841 REXO1L5P-201ENST00000622260 2098 ntBASIC14.65□□□□□ -0.06
UPK1BO75841 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
UPK1BO75841 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.65□□□□□ -0.06
UPK1BO75841 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
UPK1BO75841 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 GGT3P-204ENST00000453783 1664 ntBASIC14.65□□□□□ -0.06
UPK1BO75841 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
UPK1BO75841 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.65□□□□□ -0.06
UPK1BO75841 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
UPK1BO75841 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
UPK1BO75841 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.65□□□□□ -0.06
UPK1BO75841 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.65□□□□□ -0.06
UPK1BO75841 AC004911.1-201ENST00000416316 871 ntBASIC14.65□□□□□ -0.06
UPK1BO75841 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.65□□□□□ -0.06
UPK1BO75841 MTDHP1-201ENST00000605323 784 ntBASIC14.65□□□□□ -0.06
UPK1BO75841 AC069544.1-201ENST00000609399 999 ntBASIC14.65□□□□□ -0.06
UPK1BO75841 MIR6786-201ENST00000616843 113 ntBASIC14.65□□□□□ -0.06
UPK1BO75841 CR769767.2-201ENST00000622735 460 ntBASIC14.65□□□□□ -0.06
UPK1BO75841 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.65□□□□□ -0.06
UPK1BO75841 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
UPK1BO75841 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
UPK1BO75841 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
UPK1BO75841 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
UPK1BO75841 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 AC097637.2-201ENST00000624096 1997 ntBASIC14.65□□□□□ -0.06
UPK1BO75841 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.65□□□□□ -0.06
UPK1BO75841 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.65□□□□□ -0.06
UPK1BO75841 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.65□□□□□ -0.06
UPK1BO75841 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1BO75841 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.65□□□□□ -0.07
UPK1BO75841 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
UPK1BO75841 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
UPK1BO75841 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.64□□□□□ -0.07
UPK1BO75841 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1BO75841 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1BO75841 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1BO75841 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1BO75841 FSCN1P1-201ENST00000568912 1481 ntBASIC14.64□□□□□ -0.07
UPK1BO75841 AC005912.2-201ENST00000619492 2400 ntBASIC14.64□□□□□ -0.07
UPK1BO75841 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1BO75841 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
UPK1BO75841 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1BO75841 LINC00552-201ENST00000625151 2579 ntBASIC14.64□□□□□ -0.07
UPK1BO75841 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
UPK1BO75841 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1BO75841 AL365209.1-201ENST00000624418 6473 ntBASIC14.64□□□□□ -0.07
UPK1BO75841 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
UPK1BO75841 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
UPK1BO75841 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.64□□□□□ -0.07
UPK1BO75841 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.64□□□□□ -0.07
UPK1BO75841 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.64□□□□□ -0.07
UPK1BO75841 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.64□□□□□ -0.07
UPK1BO75841 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.64□□□□□ -0.07
UPK1BO75841 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1BO75841 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1BO75841 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1BO75841 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1BO75841 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1BO75841 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1BO75841 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.64□□□□□ -0.07
UPK1BO75841 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.64□□□□□ -0.07
UPK1BO75841 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1BO75841 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.64□□□□□ -0.07
UPK1BO75841 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
UPK1BO75841 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1BO75841 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.64□□□□□ -0.07
UPK1BO75841 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1BO75841 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1BO75841 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1BO75841 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1BO75841 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms