Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
CPNE3O75131 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.17■□□□□ 0.18
CPNE3O75131 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.17■□□□□ 0.18
CPNE3O75131 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 KRT18P28-201ENST00000453838 1332 ntBASIC16.17■□□□□ 0.18
CPNE3O75131 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.17■□□□□ 0.18
CPNE3O75131 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.17■□□□□ 0.18
CPNE3O75131 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.16■□□□□ 0.18
CPNE3O75131 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE3O75131 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE3O75131 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE3O75131 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE3O75131 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE3O75131 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE3O75131 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CPNE3O75131 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CPNE3O75131 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE3O75131 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE3O75131 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE3O75131 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE3O75131 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE3O75131 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE3O75131 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE3O75131 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE3O75131 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE3O75131 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.16■□□□□ 0.18
CPNE3O75131 METTL21AP1-201ENST00000438852 635 ntBASIC16.16■□□□□ 0.18
CPNE3O75131 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CPNE3O75131 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.16■□□□□ 0.18
CPNE3O75131 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CPNE3O75131 AC112191.1-201ENST00000523689 701 ntBASIC16.16■□□□□ 0.18
CPNE3O75131 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.16■□□□□ 0.18
CPNE3O75131 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.16■□□□□ 0.18
CPNE3O75131 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CPNE3O75131 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.16■□□□□ 0.18
CPNE3O75131 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CPNE3O75131 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.16■□□□□ 0.18
CPNE3O75131 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.16■□□□□ 0.18
CPNE3O75131 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CPNE3O75131 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CPNE3O75131 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.16■□□□□ 0.18
CPNE3O75131 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE3O75131 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE3O75131 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CPNE3O75131 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE3O75131 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE3O75131 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.16■□□□□ 0.18
CPNE3O75131 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE3O75131 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE3O75131 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE3O75131 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE3O75131 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE3O75131 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE3O75131 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE3O75131 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE3O75131 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.15■□□□□ 0.18
CPNE3O75131 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CPNE3O75131 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE3O75131 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE3O75131 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CPNE3O75131 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE3O75131 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE3O75131 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE3O75131 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.15■□□□□ 0.18
CPNE3O75131 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
CPNE3O75131 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.15■□□□□ 0.18
CPNE3O75131 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE3O75131 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.15■□□□□ 0.18
CPNE3O75131 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.15■□□□□ 0.18
CPNE3O75131 AP000344.2-201ENST00000512987 629 ntBASIC16.15■□□□□ 0.18
CPNE3O75131 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.15■□□□□ 0.18
CPNE3O75131 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CPNE3O75131 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.15■□□□□ 0.18
CPNE3O75131 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.15■□□□□ 0.18
CPNE3O75131 AL645728.2-201ENST00000641974 660 ntBASIC16.15■□□□□ 0.18
CPNE3O75131 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE3O75131 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.15■□□□□ 0.18
CPNE3O75131 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE3O75131 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE3O75131 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE3O75131 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.15■□□□□ 0.18
CPNE3O75131 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CPNE3O75131 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CPNE3O75131 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CPNE3O75131 PCDH8P1-201ENST00000428983 2773 ntBASIC16.15■□□□□ 0.18
CPNE3O75131 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE3O75131 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.15■□□□□ 0.18
CPNE3O75131 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
CPNE3O75131 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.14■□□□□ 0.18
CPNE3O75131 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.14■□□□□ 0.18
CPNE3O75131 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CPNE3O75131 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.14■□□□□ 0.18
CPNE3O75131 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms