Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 AC100791.3-201ENST00000617619 330 ntBASIC15□□□□□ -0.01
PFDN1O60925 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PFDN1O60925 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
PFDN1O60925 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15□□□□□ -0.01
PFDN1O60925 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PFDN1O60925 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PFDN1O60925 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15□□□□□ -0.01
PFDN1O60925 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15□□□□□ -0.01
PFDN1O60925 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PFDN1O60925 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.99□□□□□ -0.01
PFDN1O60925 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.99□□□□□ -0.01
PFDN1O60925 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC14.99□□□□□ -0.01
PFDN1O60925 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PFDN1O60925 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.99□□□□□ -0.01
PFDN1O60925 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 AC135279.3-201ENST00000610945 1311 ntBASIC14.99□□□□□ -0.01
PFDN1O60925 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 AL390755.1-201ENST00000623716 2027 ntBASIC14.99□□□□□ -0.01
PFDN1O60925 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.99□□□□□ -0.01
PFDN1O60925 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PFDN1O60925 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 YBX1P10-201ENST00000444752 975 ntBASIC14.99□□□□□ -0.01
PFDN1O60925 DUTP2-201ENST00000519164 463 ntBASIC14.99□□□□□ -0.01
PFDN1O60925 AC131281.2-201ENST00000520478 145 ntBASIC14.99□□□□□ -0.01
PFDN1O60925 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.99□□□□□ -0.01
PFDN1O60925 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.99□□□□□ -0.01
PFDN1O60925 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
PFDN1O60925 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC14.99□□□□□ -0.01
PFDN1O60925 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PFDN1O60925 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PFDN1O60925 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.99□□□□□ -0.01
PFDN1O60925 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PFDN1O60925 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PFDN1O60925 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
PFDN1O60925 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PFDN1O60925 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PFDN1O60925 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PFDN1O60925 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.98□□□□□ -0.01
PFDN1O60925 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
PFDN1O60925 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PFDN1O60925 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PFDN1O60925 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.98□□□□□ -0.01
PFDN1O60925 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
PFDN1O60925 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.98□□□□□ -0.01
PFDN1O60925 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.98□□□□□ -0.01
PFDN1O60925 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PFDN1O60925 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
PFDN1O60925 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PFDN1O60925 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.98□□□□□ -0.01
PFDN1O60925 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PFDN1O60925 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.98□□□□□ -0.01
PFDN1O60925 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
PFDN1O60925 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PFDN1O60925 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PFDN1O60925 AC016405.3-201ENST00000607710 860 ntBASIC14.98□□□□□ -0.01
PFDN1O60925 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PFDN1O60925 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PFDN1O60925 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PFDN1O60925 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PFDN1O60925 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PFDN1O60925 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PFDN1O60925 AC027612.1-201ENST00000445234 2395 ntBASIC14.98□□□□□ -0.01
PFDN1O60925 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PFDN1O60925 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.98□□□□□ -0.01
PFDN1O60925 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
PFDN1O60925 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
PFDN1O60925 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
PFDN1O60925 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.98□□□□□ -0.01
PFDN1O60925 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.97□□□□□ -0.01
PFDN1O60925 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PFDN1O60925 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.97□□□□□ -0.01
PFDN1O60925 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms