Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC28A2O43868 AP000344.2-201ENST00000512987 629 ntBASIC16.23■□□□□ 0.19
SLC28A2O43868 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.23■□□□□ 0.19
SLC28A2O43868 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC28A2O43868 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC28A2O43868 DUX4L17-201ENST00000557360 1267 ntBASIC16.23■□□□□ 0.19
SLC28A2O43868 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC28A2O43868 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC28A2O43868 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC28A2O43868 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC28A2O43868 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.23■□□□□ 0.19
SLC28A2O43868 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SLC28A2O43868 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SLC28A2O43868 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SLC28A2O43868 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC28A2O43868 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC28A2O43868 LINC02012-201ENST00000608206 1725 ntBASIC16.22■□□□□ 0.19
SLC28A2O43868 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC28A2O43868 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC28A2O43868 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC28A2O43868 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC28A2O43868 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
SLC28A2O43868 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC28A2O43868 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC28A2O43868 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC28A2O43868 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SLC28A2O43868 PMS2P4-201ENST00000412466 1052 ntBASIC16.22■□□□□ 0.19
SLC28A2O43868 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.22■□□□□ 0.19
SLC28A2O43868 KRT18P27-201ENST00000427733 1299 ntBASIC16.22■□□□□ 0.19
SLC28A2O43868 AC103564.2-201ENST00000432853 1299 ntBASIC16.22■□□□□ 0.19
SLC28A2O43868 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC28A2O43868 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.22■□□□□ 0.19
SLC28A2O43868 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC28A2O43868 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC28A2O43868 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC28A2O43868 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLC28A2O43868 AC025678.2-201ENST00000562061 970 ntBASIC16.22■□□□□ 0.19
SLC28A2O43868 AL031432.2-201ENST00000566714 459 ntBASIC16.22■□□□□ 0.19
SLC28A2O43868 AL928711.1-201ENST00000570165 459 ntBASIC16.22■□□□□ 0.19
SLC28A2O43868 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC28A2O43868 AL022326.1-202ENST00000641533 845 ntBASIC16.22■□□□□ 0.19
SLC28A2O43868 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC28A2O43868 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC28A2O43868 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC28A2O43868 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SLC28A2O43868 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC28A2O43868 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC28A2O43868 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC28A2O43868 AC106886.4-201ENST00000623557 2502 ntBASIC16.22■□□□□ 0.19
SLC28A2O43868 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC28A2O43868 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC28A2O43868 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC28A2O43868 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
SLC28A2O43868 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC28A2O43868 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC28A2O43868 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC28A2O43868 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC28A2O43868 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC28A2O43868 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC28A2O43868 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC28A2O43868 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
SLC28A2O43868 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
SLC28A2O43868 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC28A2O43868 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC28A2O43868 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC28A2O43868 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SLC28A2O43868 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC28A2O43868 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC28A2O43868 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC28A2O43868 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC28A2O43868 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC28A2O43868 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC28A2O43868 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC28A2O43868 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC28A2O43868 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.21■□□□□ 0.19
SLC28A2O43868 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC28A2O43868 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC28A2O43868 AC005225.4-201ENST00000557330 545 ntBASIC16.21■□□□□ 0.19
SLC28A2O43868 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC28A2O43868 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC28A2O43868 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC28A2O43868 AL008721.1-201ENST00000609964 604 ntBASIC16.21■□□□□ 0.19
SLC28A2O43868 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC28A2O43868 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms