Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
PAX4O43316 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 NF2-208ENST00000403435 2568 ntTSL 5 BASIC12.06□□□□□ -0.48
PAX4O43316 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
PAX4O43316 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
PAX4O43316 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
PAX4O43316 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.06□□□□□ -0.48
PAX4O43316 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.06□□□□□ -0.48
PAX4O43316 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.06□□□□□ -0.48
PAX4O43316 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.06□□□□□ -0.48
PAX4O43316 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.06□□□□□ -0.48
PAX4O43316 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.06□□□□□ -0.48
PAX4O43316 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.06□□□□□ -0.48
PAX4O43316 AL353135.1-201ENST00000606729 504 ntBASIC12.06□□□□□ -0.48
PAX4O43316 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.06□□□□□ -0.48
PAX4O43316 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC12.06□□□□□ -0.48
PAX4O43316 MIR1199-201ENST00000621445 119 ntBASIC12.06□□□□□ -0.48
PAX4O43316 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12.06□□□□□ -0.48
PAX4O43316 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
PAX4O43316 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.06□□□□□ -0.48
PAX4O43316 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
PAX4O43316 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.06□□□□□ -0.48
PAX4O43316 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
PAX4O43316 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.06□□□□□ -0.48
PAX4O43316 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PAX4O43316 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
PAX4O43316 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
PAX4O43316 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.05□□□□□ -0.48
PAX4O43316 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
PAX4O43316 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.05□□□□□ -0.48
PAX4O43316 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
PAX4O43316 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
PAX4O43316 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
PAX4O43316 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.05□□□□□ -0.48
PAX4O43316 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
PAX4O43316 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.05□□□□□ -0.48
PAX4O43316 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.05□□□□□ -0.48
PAX4O43316 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
PAX4O43316 KRT18P67-201ENST00000432816 1264 ntBASIC12.05□□□□□ -0.48
PAX4O43316 RPS2P1-201ENST00000434010 821 ntBASIC12.05□□□□□ -0.48
PAX4O43316 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.05□□□□□ -0.48
PAX4O43316 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.05□□□□□ -0.48
PAX4O43316 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.05□□□□□ -0.48
PAX4O43316 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.05□□□□□ -0.48
PAX4O43316 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.05□□□□□ -0.48
PAX4O43316 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.05□□□□□ -0.48
PAX4O43316 AC025062.2-201ENST00000605477 670 ntBASIC12.05□□□□□ -0.48
PAX4O43316 AC107918.4-202ENST00000641623 219 ntBASIC12.05□□□□□ -0.48
PAX4O43316 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.05□□□□□ -0.48
PAX4O43316 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC12.05□□□□□ -0.48
PAX4O43316 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
PAX4O43316 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.05□□□□□ -0.48
PAX4O43316 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PAX4O43316 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
PAX4O43316 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms