Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 LINC00895-201ENST00000629028 1637 ntBASIC16.78■□□□□ 0.28
MID1O15344 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MID1O15344 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MID1O15344 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MID1O15344 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.77■□□□□ 0.28
MID1O15344 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MID1O15344 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.77■□□□□ 0.28
MID1O15344 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MID1O15344 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.77■□□□□ 0.28
MID1O15344 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
MID1O15344 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
MID1O15344 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
MID1O15344 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MID1O15344 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MID1O15344 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MID1O15344 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MID1O15344 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MID1O15344 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MID1O15344 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.77■□□□□ 0.28
MID1O15344 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MID1O15344 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MID1O15344 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.77■□□□□ 0.28
MID1O15344 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.77■□□□□ 0.28
MID1O15344 SPDYE14P-201ENST00000442619 822 ntBASIC16.77■□□□□ 0.28
MID1O15344 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.77■□□□□ 0.28
MID1O15344 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.77■□□□□ 0.28
MID1O15344 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.77■□□□□ 0.28
MID1O15344 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MID1O15344 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
MID1O15344 AL138918.1-201ENST00000568306 659 ntBASIC16.77■□□□□ 0.28
MID1O15344 MIR3197-201ENST00000582241 73 ntBASIC16.77■□□□□ 0.28
MID1O15344 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
MID1O15344 AC092364.2-202ENST00000597012 1073 ntBASIC16.77■□□□□ 0.28
MID1O15344 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MID1O15344 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.77■□□□□ 0.28
MID1O15344 AC084121.4-201ENST00000641598 221 ntBASIC16.77■□□□□ 0.28
MID1O15344 AF228730.8-201ENST00000642140 221 ntBASIC16.77■□□□□ 0.28
MID1O15344 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MID1O15344 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MID1O15344 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
MID1O15344 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
MID1O15344 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
MID1O15344 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MID1O15344 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MID1O15344 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MID1O15344 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
MID1O15344 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MID1O15344 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
MID1O15344 TUBB3P1-201ENST00000405796 1332 ntBASIC16.76■□□□□ 0.27
MID1O15344 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.76■□□□□ 0.27
MID1O15344 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.76■□□□□ 0.27
MID1O15344 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
MID1O15344 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MID1O15344 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MID1O15344 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.76■□□□□ 0.27
MID1O15344 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MID1O15344 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MID1O15344 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.76■□□□□ 0.27
MID1O15344 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MID1O15344 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MID1O15344 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MID1O15344 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
MID1O15344 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MID1O15344 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MID1O15344 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.76■□□□□ 0.27
MID1O15344 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MID1O15344 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
MID1O15344 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.76■□□□□ 0.27
MID1O15344 BCRP1-201ENST00000444246 691 ntBASIC16.76■□□□□ 0.27
MID1O15344 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
MID1O15344 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MID1O15344 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MID1O15344 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
MID1O15344 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.76■□□□□ 0.27
MID1O15344 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MID1O15344 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MID1O15344 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MID1O15344 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MID1O15344 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MID1O15344 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MID1O15344 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MID1O15344 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.76■□□□□ 0.27
MID1O15344 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.75■□□□□ 0.27
MID1O15344 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MID1O15344 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
MID1O15344 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.75■□□□□ 0.27
MID1O15344 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
MID1O15344 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.75■□□□□ 0.27
MID1O15344 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MID1O15344 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MID1O15344 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MID1O15344 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.75■□□□□ 0.27
MID1O15344 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
MID1O15344 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MID1O15344 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MID1O15344 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.75■□□□□ 0.27
MID1O15344 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.75■□□□□ 0.27
MID1O15344 AC051619.7-201ENST00000568314 623 ntBASIC16.75■□□□□ 0.27
MID1O15344 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MID1O15344 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms