Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH17O14917 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH17O14917 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH17O14917 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PCDH17O14917 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
PCDH17O14917 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH17O14917 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH17O14917 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH17O14917 AC093525.9-201ENST00000624961 1746 ntBASIC16.08■□□□□ 0.16
PCDH17O14917 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH17O14917 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH17O14917 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDH17O14917 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDH17O14917 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PCDH17O14917 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH17O14917 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH17O14917 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDH17O14917 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDH17O14917 RNF216P1-203ENST00000404404 2427 ntBASIC16.07■□□□□ 0.16
PCDH17O14917 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH17O14917 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH17O14917 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH17O14917 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
PCDH17O14917 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PCDH17O14917 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDH17O14917 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDH17O14917 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDH17O14917 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH17O14917 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDH17O14917 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDH17O14917 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDH17O14917 AC096734.2-201ENST00000562054 433 ntBASIC16.07■□□□□ 0.16
PCDH17O14917 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDH17O14917 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH17O14917 AC055717.3-201ENST00000622967 595 ntBASIC16.07■□□□□ 0.16
PCDH17O14917 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDH17O14917 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH17O14917 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDH17O14917 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDH17O14917 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PCDH17O14917 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH17O14917 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH17O14917 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
PCDH17O14917 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDH17O14917 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDH17O14917 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH17O14917 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDH17O14917 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH17O14917 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH17O14917 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH17O14917 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH17O14917 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH17O14917 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
PCDH17O14917 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDH17O14917 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PCDH17O14917 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDH17O14917 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PCDH17O14917 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PCDH17O14917 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH17O14917 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH17O14917 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH17O14917 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH17O14917 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDH17O14917 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDH17O14917 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH17O14917 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH17O14917 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH17O14917 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDH17O14917 AC129492.6-201ENST00000611383 1305 ntBASIC16.06■□□□□ 0.16
PCDH17O14917 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH17O14917 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDH17O14917 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH17O14917 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
PCDH17O14917 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDH17O14917 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH17O14917 AC007967.2-201ENST00000432613 625 ntBASIC16.06■□□□□ 0.16
PCDH17O14917 PAWRP1-201ENST00000451083 565 ntBASIC16.06■□□□□ 0.16
PCDH17O14917 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
PCDH17O14917 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PCDH17O14917 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDH17O14917 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDH17O14917 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PCDH17O14917 AC007064.4-201ENST00000637740 555 ntBASIC16.06■□□□□ 0.16
PCDH17O14917 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDH17O14917 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDH17O14917 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDH17O14917 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDH17O14917 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH17O14917 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH17O14917 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH17O14917 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PCDH17O14917 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH17O14917 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDH17O14917 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH17O14917 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH17O14917 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH17O14917 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDH17O14917 AL391005.1-201ENST00000623953 2435 ntBASIC16.05■□□□□ 0.16
PCDH17O14917 AC079328.2-201ENST00000561241 3354 ntBASIC16.05■□□□□ 0.16
PCDH17O14917 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms