Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.8■□□□□ 0.12
KPNA4O00629 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KPNA4O00629 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.8■□□□□ 0.12
KPNA4O00629 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KPNA4O00629 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KPNA4O00629 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KPNA4O00629 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KPNA4O00629 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KPNA4O00629 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KPNA4O00629 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KPNA4O00629 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.8■□□□□ 0.12
KPNA4O00629 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
KPNA4O00629 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KPNA4O00629 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KPNA4O00629 AC016734.2-201ENST00000624325 1377 ntBASIC15.8■□□□□ 0.12
KPNA4O00629 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
KPNA4O00629 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KPNA4O00629 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KPNA4O00629 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.8■□□□□ 0.12
KPNA4O00629 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.8■□□□□ 0.12
KPNA4O00629 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.8■□□□□ 0.12
KPNA4O00629 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.8■□□□□ 0.12
KPNA4O00629 FAM86EP-206ENST00000510506 987 ntBASIC15.8■□□□□ 0.12
KPNA4O00629 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.8■□□□□ 0.12
KPNA4O00629 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KPNA4O00629 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KPNA4O00629 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KPNA4O00629 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.8■□□□□ 0.12
KPNA4O00629 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KPNA4O00629 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.8■□□□□ 0.12
KPNA4O00629 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
KPNA4O00629 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.79■□□□□ 0.12
KPNA4O00629 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.79■□□□□ 0.12
KPNA4O00629 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
KPNA4O00629 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.79■□□□□ 0.12
KPNA4O00629 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 AC246785.2-201ENST00000432512 513 ntBASIC15.79■□□□□ 0.12
KPNA4O00629 AC103564.2-201ENST00000432853 1299 ntBASIC15.79■□□□□ 0.12
KPNA4O00629 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.79■□□□□ 0.12
KPNA4O00629 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.79■□□□□ 0.12
KPNA4O00629 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
KPNA4O00629 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
KPNA4O00629 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
KPNA4O00629 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
KPNA4O00629 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
KPNA4O00629 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.79■□□□□ 0.12
KPNA4O00629 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.79■□□□□ 0.12
KPNA4O00629 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KPNA4O00629 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.79■□□□□ 0.12
KPNA4O00629 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KPNA4O00629 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KPNA4O00629 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KPNA4O00629 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KPNA4O00629 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.78■□□□□ 0.12
KPNA4O00629 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.78■□□□□ 0.12
KPNA4O00629 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
KPNA4O00629 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KPNA4O00629 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
KPNA4O00629 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
KPNA4O00629 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.78■□□□□ 0.12
KPNA4O00629 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KPNA4O00629 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.78■□□□□ 0.12
KPNA4O00629 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
KPNA4O00629 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
KPNA4O00629 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KPNA4O00629 PCED1CP-201ENST00000419887 785 ntBASIC15.78■□□□□ 0.12
KPNA4O00629 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.78■□□□□ 0.12
KPNA4O00629 TSSC2-201ENST00000450217 709 ntBASIC15.78■□□□□ 0.12
KPNA4O00629 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.78■□□□□ 0.12
KPNA4O00629 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.78■□□□□ 0.12
KPNA4O00629 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
KPNA4O00629 STK25P1-201ENST00000585406 838 ntBASIC15.78■□□□□ 0.12
KPNA4O00629 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KPNA4O00629 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KPNA4O00629 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KPNA4O00629 AL365209.1-201ENST00000624418 6473 ntBASIC15.78■□□□□ 0.12
KPNA4O00629 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KPNA4O00629 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
KPNA4O00629 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KPNA4O00629 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms