Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC105339.1-204ENST00000636249 355 ntBASIC18.87■□□□□ 0.61
DDX39AO00148 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
DDX39AO00148 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
DDX39AO00148 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
DDX39AO00148 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
DDX39AO00148 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX39AO00148 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX39AO00148 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
DDX39AO00148 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.86■□□□□ 0.61
DDX39AO00148 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX39AO00148 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX39AO00148 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX39AO00148 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
DDX39AO00148 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
DDX39AO00148 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
DDX39AO00148 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX39AO00148 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.86■□□□□ 0.61
DDX39AO00148 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
DDX39AO00148 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DDX39AO00148 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.86■□□□□ 0.61
DDX39AO00148 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX39AO00148 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX39AO00148 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
DDX39AO00148 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX39AO00148 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.86■□□□□ 0.61
DDX39AO00148 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.86■□□□□ 0.61
DDX39AO00148 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
DDX39AO00148 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.86■□□□□ 0.61
DDX39AO00148 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.86■□□□□ 0.61
DDX39AO00148 AC022145.2-201ENST00000598203 171 ntBASIC18.86■□□□□ 0.61
DDX39AO00148 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX39AO00148 AC027612.4-201ENST00000605371 583 ntBASIC18.86■□□□□ 0.61
DDX39AO00148 AC026120.1-201ENST00000611536 926 ntBASIC18.86■□□□□ 0.61
DDX39AO00148 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DDX39AO00148 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX39AO00148 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
DDX39AO00148 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
DDX39AO00148 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.86■□□□□ 0.61
DDX39AO00148 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX39AO00148 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.86■□□□□ 0.61
DDX39AO00148 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX39AO00148 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
DDX39AO00148 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX39AO00148 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
DDX39AO00148 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX39AO00148 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX39AO00148 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.85■□□□□ 0.61
DDX39AO00148 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.85■□□□□ 0.61
DDX39AO00148 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
DDX39AO00148 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX39AO00148 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX39AO00148 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX39AO00148 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DDX39AO00148 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
DDX39AO00148 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX39AO00148 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX39AO00148 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.85■□□□□ 0.61
DDX39AO00148 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.85■□□□□ 0.61
DDX39AO00148 TFAMP1-201ENST00000412727 736 ntBASIC18.85■□□□□ 0.61
DDX39AO00148 METTL21AP1-201ENST00000438852 635 ntBASIC18.85■□□□□ 0.61
DDX39AO00148 SPDYE11-202ENST00000450699 704 ntBASIC18.85■□□□□ 0.61
DDX39AO00148 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
DDX39AO00148 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.85■□□□□ 0.61
DDX39AO00148 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
DDX39AO00148 AL135744.1-201ENST00000565098 629 ntBASIC18.85■□□□□ 0.61
DDX39AO00148 SPDYE9P-201ENST00000570642 692 ntBASIC18.85■□□□□ 0.61
DDX39AO00148 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DDX39AO00148 SPDYE10P-202ENST00000612005 668 ntBASIC18.85■□□□□ 0.61
DDX39AO00148 SPDYE8P-202ENST00000612377 668 ntBASIC18.85■□□□□ 0.61
DDX39AO00148 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
DDX39AO00148 AL513210.1-201ENST00000629608 234 ntBASIC18.85■□□□□ 0.61
DDX39AO00148 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.85■□□□□ 0.61
DDX39AO00148 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX39AO00148 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
DDX39AO00148 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DDX39AO00148 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX39AO00148 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX39AO00148 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX39AO00148 AL645728.1-201ENST00000366221 2101 ntBASIC18.85■□□□□ 0.61
DDX39AO00148 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DDX39AO00148 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX39AO00148 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
DDX39AO00148 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX39AO00148 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX39AO00148 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
DDX39AO00148 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
DDX39AO00148 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX39AO00148 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.84■□□□□ 0.61
DDX39AO00148 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.84■□□□□ 0.61
DDX39AO00148 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX39AO00148 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.84■□□□□ 0.61
DDX39AO00148 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.84■□□□□ 0.61
DDX39AO00148 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX39AO00148 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX39AO00148 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX39AO00148 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
DDX39AO00148 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX39AO00148 AP000344.2-201ENST00000512987 629 ntBASIC18.84■□□□□ 0.61
DDX39AO00148 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
DDX39AO00148 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms