Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM88BA6NKF7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 AL021920.2-201ENST00000624828 1351 ntBASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 AC253536.4-201ENST00000440539 267 ntBASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 RN7SL399P-201ENST00000471648 279 ntBASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 U62317.3-201ENST00000608319 855 ntBASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM88BA6NKF7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 HINT2P1-201ENST00000419438 481 ntBASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 AL442647.2-201ENST00000429864 857 ntBASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM88BA6NKF7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 LDHBP1-201ENST00000455730 1119 ntBASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 PTP4A1P2-201ENST00000546033 454 ntBASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88BA6NKF7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms