Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 AC078925.2-201ENST00000624013 1973 ntBASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 AL513480.1-201ENST00000451731 511 ntBASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 ALG1L5P-201ENST00000482043 771 ntBASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 AL691403.2-201ENST00000618460 490 ntBASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 REXO1L3P-201ENST00000622202 1288 ntBASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 AC074386.1-202ENST00000463561 864 ntBASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 AC005829.1-201ENST00000570002 483 ntBASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 C20orf181-201ENST00000623918 480 ntBASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.78■□□□□ 0.6
COL4A3BPQ9Y5P4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 AL078644.1-201ENST00000609881 752 ntBASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.77■□□□□ 0.6
COL4A3BPQ9Y5P4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
COL4A3BPQ9Y5P4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
COL4A3BPQ9Y5P4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL4A3BPQ9Y5P4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.77■□□□□ 0.59
COL4A3BPQ9Y5P4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL4A3BPQ9Y5P4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms