Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 MKNK2P1-201ENST00000437526 628 ntBASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 AC008667.4-201ENST00000607370 168 ntBASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 GGTLC5P-201ENST00000617623 998 ntBASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 AGGF1P2-201ENST00000426656 2106 ntBASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 AC087163.2-201ENST00000457299 853 ntBASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 AC078925.2-201ENST00000624013 1973 ntBASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB1Q9Y5F3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 TOP3BP1-201ENST00000420768 1380 ntBASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 LINC00895-201ENST00000629028 1637 ntBASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 IGLL3P-201ENST00000412472 434 ntBASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 FAM8A3P-201ENST00000427218 844 ntBASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 PRSS29P-201ENST00000440800 595 ntBASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 AL031432.2-201ENST00000566714 459 ntBASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 AL928711.1-201ENST00000570165 459 ntBASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 AC092364.2-202ENST00000597012 1073 ntBASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 AC027612.4-201ENST00000605371 583 ntBASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms