Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AL592309.1-201ENST00000443127 649 ntBASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 AC109322.1-201ENST00000524499 1264 ntBASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 RARRES2P8-201ENST00000566335 367 ntBASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 AL096865.1-201ENST00000606796 927 ntBASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 AC093512.1-201ENST00000617969 520 ntBASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SSX2IPQ9Y2D8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.08■□□□□ 0.49
SSX2IPQ9Y2D8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SSX2IPQ9Y2D8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
SSX2IPQ9Y2D8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SSX2IPQ9Y2D8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SSX2IPQ9Y2D8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SSX2IPQ9Y2D8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SSX2IPQ9Y2D8 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SSX2IPQ9Y2D8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SSX2IPQ9Y2D8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.08■□□□□ 0.49
SSX2IPQ9Y2D8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.08■□□□□ 0.49
SSX2IPQ9Y2D8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
SSX2IPQ9Y2D8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.08■□□□□ 0.49
SSX2IPQ9Y2D8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
SSX2IPQ9Y2D8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 KRT8P48-201ENST00000515599 1220 ntBASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 AC012569.1-201ENST00000591191 1524 ntBASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSX2IPQ9Y2D8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms