Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 AC025580.3-201ENST00000617932 1424 ntBASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 KRT19P2-202ENST00000557173 1012 ntBASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 AC023141.13-201ENST00000604991 943 ntBASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 AC079328.2-201ENST00000561241 3354 ntBASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.63■□□□□ 0.57
BLOC1S4Q9NUP1 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 AL671883.3-201ENST00000603274 991 ntBASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 AL513190.1-201ENST00000621254 727 ntBASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 AC092865.6-201ENST00000642101 219 ntBASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 BCAR1-209ENST00000546196 1340 ntBASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 GPAA1P2-202ENST00000606848 1787 ntBASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 AC006449.5-201ENST00000610658 2098 ntBASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 AC092364.2-201ENST00000596710 2692 ntBASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
BLOC1S4Q9NUP1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BLOC1S4Q9NUP1 PCDH8P1-201ENST00000428983 2773 ntBASIC18.61■□□□□ 0.57
BLOC1S4Q9NUP1 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
BLOC1S4Q9NUP1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BLOC1S4Q9NUP1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BLOC1S4Q9NUP1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BLOC1S4Q9NUP1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BLOC1S4Q9NUP1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms