Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 AC023274.1-201ENST00000418278 595 ntBASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 AC040169.1-201ENST00000565382 521 ntBASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.43■□□□□ 0.86
ECHDC1Q9NTX5 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 AC074386.1-202ENST00000463561 864 ntBASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 MIR3909-201ENST00000579518 119 ntBASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 AL031055.1-201ENST00000606362 631 ntBASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 PCDHA14-201ENST00000506751 2298 ntBASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 AC092919.2-201ENST00000623631 1645 ntBASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
ECHDC1Q9NTX5 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 AL031731.1-201ENST00000642131 2094 ntBASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 AC140658.5-201ENST00000438532 169 ntBASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 PMS2P7-201ENST00000506558 1336 ntBASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC1Q9NTX5 AC084018.2-201ENST00000613093 2607 ntBASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms