Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 COX5BP2-201ENST00000392354 334 ntBASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 SNORA78-201ENST00000459373 127 ntBASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 AC141257.4-201ENST00000634557 245 ntBASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 AC136944.6-201ENST00000634818 245 ntBASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 AC104640.1-201ENST00000562617 2109 ntBASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
SND1-IT1Q9HBX3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 AL353692.3-201ENST00000407031 1396 ntBASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 MMP23A-201ENST00000234610 1017 ntBASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 FAM8A6P-201ENST00000407496 1135 ntBASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms