Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS11Q9H270 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VPS11Q9H270 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS11Q9H270 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
VPS11Q9H270 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
VPS11Q9H270 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.96■□□□□ 0.31
VPS11Q9H270 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
VPS11Q9H270 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
VPS11Q9H270 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS11Q9H270 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VPS11Q9H270 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
VPS11Q9H270 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS11Q9H270 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS11Q9H270 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS11Q9H270 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS11Q9H270 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.96■□□□□ 0.31
VPS11Q9H270 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS11Q9H270 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS11Q9H270 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS11Q9H270 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS11Q9H270 SIGLEC30P-201ENST00000455569 941 ntBASIC16.96■□□□□ 0.31
VPS11Q9H270 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.96■□□□□ 0.31
VPS11Q9H270 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VPS11Q9H270 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
VPS11Q9H270 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
VPS11Q9H270 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
VPS11Q9H270 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
VPS11Q9H270 PMPCAP1-201ENST00000508114 1576 ntBASIC16.96■□□□□ 0.31
VPS11Q9H270 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS11Q9H270 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
VPS11Q9H270 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.96■□□□□ 0.31
VPS11Q9H270 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS11Q9H270 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.96■□□□□ 0.31
VPS11Q9H270 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
VPS11Q9H270 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
VPS11Q9H270 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS11Q9H270 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
VPS11Q9H270 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS11Q9H270 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
VPS11Q9H270 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
VPS11Q9H270 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
VPS11Q9H270 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
VPS11Q9H270 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
VPS11Q9H270 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.96■□□□□ 0.3
VPS11Q9H270 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
VPS11Q9H270 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VPS11Q9H270 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.96■□□□□ 0.3
VPS11Q9H270 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VPS11Q9H270 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS11Q9H270 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS11Q9H270 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS11Q9H270 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS11Q9H270 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS11Q9H270 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS11Q9H270 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.95■□□□□ 0.3
VPS11Q9H270 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
VPS11Q9H270 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.95■□□□□ 0.3
VPS11Q9H270 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.95■□□□□ 0.3
VPS11Q9H270 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS11Q9H270 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
VPS11Q9H270 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
VPS11Q9H270 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.95■□□□□ 0.3
VPS11Q9H270 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS11Q9H270 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS11Q9H270 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.95■□□□□ 0.3
VPS11Q9H270 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.95■□□□□ 0.3
VPS11Q9H270 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.95■□□□□ 0.3
VPS11Q9H270 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.95■□□□□ 0.3
VPS11Q9H270 RCN1P2-201ENST00000398357 915 ntBASIC16.95■□□□□ 0.3
VPS11Q9H270 AL020989.1-201ENST00000422979 469 ntBASIC16.95■□□□□ 0.3
VPS11Q9H270 NUS1P1-201ENST00000446295 882 ntBASIC16.95■□□□□ 0.3
VPS11Q9H270 TSSC2-201ENST00000450217 709 ntBASIC16.95■□□□□ 0.3
VPS11Q9H270 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS11Q9H270 TOB2P1-201ENST00000469761 992 ntBASIC16.95■□□□□ 0.3
VPS11Q9H270 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.95■□□□□ 0.3
VPS11Q9H270 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
VPS11Q9H270 BNIP3P18-201ENST00000593976 575 ntBASIC16.95■□□□□ 0.3
VPS11Q9H270 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.95■□□□□ 0.3
VPS11Q9H270 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS11Q9H270 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS11Q9H270 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
VPS11Q9H270 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS11Q9H270 NSUN5P1-202ENST00000421140 1535 ntBASIC16.95■□□□□ 0.3
VPS11Q9H270 NSUN5P2-203ENST00000457352 1529 ntBASIC16.95■□□□□ 0.3
VPS11Q9H270 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS11Q9H270 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS11Q9H270 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS11Q9H270 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS11Q9H270 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
VPS11Q9H270 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VPS11Q9H270 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.94■□□□□ 0.3
VPS11Q9H270 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.94■□□□□ 0.3
VPS11Q9H270 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
VPS11Q9H270 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS11Q9H270 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS11Q9H270 MST1L-201ENST00000442552 2185 ntBASIC16.94■□□□□ 0.3
VPS11Q9H270 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.94■□□□□ 0.3
VPS11Q9H270 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.94■□□□□ 0.3
VPS11Q9H270 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VPS11Q9H270 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms