Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 KYNUP2-201ENST00000582280 1329 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 FEM1AP4-201ENST00000443167 1987 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 AC008040.5-201ENST00000599781 1781 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 TAC1-203ENST00000350485 975 ntTSL 5 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 RNU6-553P-201ENST00000364047 96 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 ATP5F1P4-201ENST00000397288 746 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 AL032822.1-201ENST00000405827 1063 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 SMARCE1P1-201ENST00000417747 1186 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 AKR1B1P8-201ENST00000418396 936 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 SDAD1P3-201ENST00000427380 333 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 LARP1BP3-201ENST00000437229 869 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 SMYD1-202ENST00000438570 680 ntTSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 ELOCP3-201ENST00000439303 348 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 RNU6-956P-201ENST00000458868 103 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 TPT1P3-201ENST00000492841 512 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 AC136628.2-201ENST00000505650 1142 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 AC113420.1-201ENST00000507903 571 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 MEPE-206ENST00000511670 550 ntTSL 4 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 MAST4-IT1-201ENST00000514241 658 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 CR383658.1-201ENST00000514609 734 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 RN7SKP248-201ENST00000516278 305 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 RNU6-405P-201ENST00000516637 110 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 AC008429.1-201ENST00000520067 966 ntTSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 AC092709.1-201ENST00000521355 1045 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 EIF1AD-206ENST00000527249 889 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 LMO3-211ENST00000534946 1016 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 AL135744.1-201ENST00000565098 629 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 AC102797.1-201ENST00000565127 545 ntTSL 4 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 AC007608.3-202ENST00000570241 1109 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 AC010542.5-201ENST00000612427 382 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 Metazoa_SRP.138-201ENST00000615369 298 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 AC090574.1-201ENST00000623186 233 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 MT-RNR2-201ENST00000387347 1559 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 AC011447.7-201ENST00000624228 1590 ntBASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 FMR1-220ENST00000621987 1352 ntTSL 5 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC10.62□□□□□ -0.71
KRTAP3-3Q9BYR6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
KRTAP3-3Q9BYR6 CDNF-202ENST00000378442 1492 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
KRTAP3-3Q9BYR6 HHLA2-205ENST00000467562 1457 ntTSL 2 BASIC10.62□□□□□ -0.71
KRTAP3-3Q9BYR6 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC10.62□□□□□ -0.71
KRTAP3-3Q9BYR6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC10.62□□□□□ -0.71
KRTAP3-3Q9BYR6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
KRTAP3-3Q9BYR6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
KRTAP3-3Q9BYR6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC10.62□□□□□ -0.71
KRTAP3-3Q9BYR6 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
KRTAP3-3Q9BYR6 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC10.62□□□□□ -0.71
KRTAP3-3Q9BYR6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
KRTAP3-3Q9BYR6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
KRTAP3-3Q9BYR6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC10.62□□□□□ -0.71
KRTAP3-3Q9BYR6 IKZF3-209ENST00000377952 1435 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
KRTAP3-3Q9BYR6 HNRNPA1P61-201ENST00000342073 924 ntBASIC10.62□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms