Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 SLC22A20-204ENST00000530038 1673 ntBASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 BRWD1P1-201ENST00000401091 371 ntBASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 GPAA1P2-201ENST00000417923 928 ntBASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 AC005229.1-201ENST00000392885 409 ntBASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 MIR4706-201ENST00000582134 82 ntBASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD1Q96PZ7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 RN7SL219P-201ENST00000582872 296 ntBASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 AC015967.2-201ENST00000624092 234 ntBASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 AC006435.4-201ENST00000625037 234 ntBASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 AL356737.1-201ENST00000634391 234 ntBASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 AL033527.5-201ENST00000641382 801 ntBASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 AC105233.2-201ENST00000523697 349 ntBASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 AF228730.5-201ENST00000530288 346 ntBASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 AC023310.3-201ENST00000557027 670 ntBASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 AC100756.1-201ENST00000562736 682 ntBASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 AC138749.3-201ENST00000567691 622 ntBASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 AC116165.1-201ENST00000611806 668 ntBASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 LINC02199-201ENST00000506655 2702 ntBASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CSMD1Q96PZ7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.12□□□□□ -0.15
CSMD1Q96PZ7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms