Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC17Q96LX7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC17Q96LX7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC17Q96LX7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC17Q96LX7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.5■□□□□ 0.71
CCDC17Q96LX7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC17Q96LX7 SPCS2P1-201ENST00000561636 679 ntBASIC19.5■□□□□ 0.71
CCDC17Q96LX7 AC140878.1-201ENST00000565277 250 ntBASIC19.5■□□□□ 0.71
CCDC17Q96LX7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC17Q96LX7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC17Q96LX7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
CCDC17Q96LX7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC17Q96LX7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC17Q96LX7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC17Q96LX7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC17Q96LX7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC17Q96LX7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC17Q96LX7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC17Q96LX7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC17Q96LX7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC17Q96LX7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC17Q96LX7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC17Q96LX7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 AL645608.8-201ENST00000606034 2086 ntBASIC19.49■□□□□ 0.71
CCDC17Q96LX7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 AC107890.1-201ENST00000422478 521 ntBASIC19.49■□□□□ 0.71
CCDC17Q96LX7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 AL096865.1-201ENST00000606796 927 ntBASIC19.49■□□□□ 0.71
CCDC17Q96LX7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 AC060834.1-201ENST00000443027 2032 ntBASIC19.49■□□□□ 0.71
CCDC17Q96LX7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC17Q96LX7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 MIR6080-201ENST00000617359 66 ntBASIC19.48■□□□□ 0.71
CCDC17Q96LX7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC17Q96LX7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 AC073439.1-201ENST00000624121 1774 ntBASIC19.47■□□□□ 0.71
CCDC17Q96LX7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms