Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRC46Q96FV0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRC46Q96FV0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LRRC46Q96FV0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC46Q96FV0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
LRRC46Q96FV0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC46Q96FV0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LRRC46Q96FV0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 BCAR1-209ENST00000546196 1340 ntBASIC15.23■□□□□ 0.03
LRRC46Q96FV0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 AC009949.1-201ENST00000623048 1830 ntBASIC15.23■□□□□ 0.03
LRRC46Q96FV0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 CNN2P11-201ENST00000429351 262 ntBASIC15.23■□□□□ 0.03
LRRC46Q96FV0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 AC018845.2-201ENST00000568326 409 ntBASIC15.23■□□□□ 0.03
LRRC46Q96FV0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 AL355385.1-201ENST00000606123 409 ntBASIC15.23■□□□□ 0.03
LRRC46Q96FV0 AL353135.1-201ENST00000606729 504 ntBASIC15.23■□□□□ 0.03
LRRC46Q96FV0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 LINC00554-201ENST00000564841 3011 ntBASIC15.23■□□□□ 0.03
LRRC46Q96FV0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 ELL2P1-201ENST00000413990 1906 ntBASIC15.23■□□□□ 0.03
LRRC46Q96FV0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 PI4KAP1-204ENST00000612579 1703 ntBASIC15.23■□□□□ 0.03
LRRC46Q96FV0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 PKD1P5-201ENST00000532415 10291 ntBASIC15.23■□□□□ 0.03
LRRC46Q96FV0 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LRRC46Q96FV0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 PTCHD3P3-201ENST00000403073 906 ntBASIC15.22■□□□□ 0.03
LRRC46Q96FV0 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 METTL21AP1-201ENST00000438852 635 ntBASIC15.22■□□□□ 0.03
LRRC46Q96FV0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 PDPK2P-202ENST00000562415 1191 ntBASIC15.22■□□□□ 0.03
LRRC46Q96FV0 AC027796.2-201ENST00000575326 344 ntBASIC15.22■□□□□ 0.03
LRRC46Q96FV0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 AC093677.2-201ENST00000600169 1863 ntBASIC15.22■□□□□ 0.03
LRRC46Q96FV0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC46Q96FV0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms