Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.13■□□□□ 0.33
RTP4Q96DX8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.13■□□□□ 0.33
RTP4Q96DX8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RTP4Q96DX8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RTP4Q96DX8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RTP4Q96DX8 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTP4Q96DX8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RTP4Q96DX8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RTP4Q96DX8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.12■□□□□ 0.33
RTP4Q96DX8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTP4Q96DX8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.12■□□□□ 0.33
RTP4Q96DX8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTP4Q96DX8 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RTP4Q96DX8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RTP4Q96DX8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.12■□□□□ 0.33
RTP4Q96DX8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RTP4Q96DX8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.12■□□□□ 0.33
RTP4Q96DX8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RTP4Q96DX8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RTP4Q96DX8 AC018712.1-201ENST00000455767 687 ntBASIC17.12■□□□□ 0.33
RTP4Q96DX8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.12■□□□□ 0.33
RTP4Q96DX8 AC093909.1-201ENST00000504731 1122 ntBASIC17.12■□□□□ 0.33
RTP4Q96DX8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.12■□□□□ 0.33
RTP4Q96DX8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.12■□□□□ 0.33
RTP4Q96DX8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RTP4Q96DX8 AC006538.3-201ENST00000612495 578 ntBASIC17.12■□□□□ 0.33
RTP4Q96DX8 AC008735.5-201ENST00000623544 497 ntBASIC17.12■□□□□ 0.33
RTP4Q96DX8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.12■□□□□ 0.33
RTP4Q96DX8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTP4Q96DX8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RTP4Q96DX8 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTP4Q96DX8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.12■□□□□ 0.33
RTP4Q96DX8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTP4Q96DX8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTP4Q96DX8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.12■□□□□ 0.33
RTP4Q96DX8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTP4Q96DX8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTP4Q96DX8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTP4Q96DX8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.12■□□□□ 0.33
RTP4Q96DX8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTP4Q96DX8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 AC022188.1-201ENST00000620960 1664 ntBASIC17.11■□□□□ 0.33
RTP4Q96DX8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 HCG4-201ENST00000418983 998 ntBASIC17.11■□□□□ 0.33
RTP4Q96DX8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 RNPS1P1-201ENST00000507437 918 ntBASIC17.11■□□□□ 0.33
RTP4Q96DX8 AC073648.2-201ENST00000510116 352 ntBASIC17.11■□□□□ 0.33
RTP4Q96DX8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 AC087641.1-201ENST00000557561 1021 ntBASIC17.11■□□□□ 0.33
RTP4Q96DX8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTP4Q96DX8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.11■□□□□ 0.33
RTP4Q96DX8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTP4Q96DX8 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTP4Q96DX8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTP4Q96DX8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms