Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL2Q92772 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CDKL2Q92772 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.02■□□□□ 0.32
CDKL2Q92772 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.02■□□□□ 0.32
CDKL2Q92772 MIR5100-201ENST00000579544 119 ntBASIC17.02■□□□□ 0.32
CDKL2Q92772 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL2Q92772 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDKL2Q92772 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CDKL2Q92772 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CDKL2Q92772 AL139011.1-202ENST00000642063 584 ntBASIC17.02■□□□□ 0.32
CDKL2Q92772 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL2Q92772 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDKL2Q92772 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDKL2Q92772 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKL2Q92772 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.02■□□□□ 0.31
CDKL2Q92772 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.02■□□□□ 0.31
CDKL2Q92772 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKL2Q92772 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKL2Q92772 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKL2Q92772 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDKL2Q92772 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKL2Q92772 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDKL2Q92772 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKL2Q92772 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKL2Q92772 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKL2Q92772 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKL2Q92772 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDKL2Q92772 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKL2Q92772 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDKL2Q92772 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CDKL2Q92772 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.01■□□□□ 0.31
CDKL2Q92772 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.01■□□□□ 0.31
CDKL2Q92772 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.01■□□□□ 0.31
CDKL2Q92772 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.01■□□□□ 0.31
CDKL2Q92772 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.01■□□□□ 0.31
CDKL2Q92772 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.01■□□□□ 0.31
CDKL2Q92772 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.01■□□□□ 0.31
CDKL2Q92772 AC013467.2-201ENST00000605472 835 ntBASIC17.01■□□□□ 0.31
CDKL2Q92772 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CDKL2Q92772 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDKL2Q92772 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.01■□□□□ 0.31
CDKL2Q92772 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDKL2Q92772 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.01■□□□□ 0.31
CDKL2Q92772 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.01■□□□□ 0.31
CDKL2Q92772 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.01■□□□□ 0.31
CDKL2Q92772 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.01■□□□□ 0.31
CDKL2Q92772 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.01■□□□□ 0.31
CDKL2Q92772 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CDKL2Q92772 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDKL2Q92772 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.01■□□□□ 0.31
CDKL2Q92772 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 AC243591.1-201ENST00000452967 1364 ntBASIC17.01■□□□□ 0.31
CDKL2Q92772 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.01■□□□□ 0.31
CDKL2Q92772 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL2Q92772 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CDKL2Q92772 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17■□□□□ 0.31
CDKL2Q92772 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDKL2Q92772 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDKL2Q92772 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDKL2Q92772 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17■□□□□ 0.31
CDKL2Q92772 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDKL2Q92772 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17■□□□□ 0.31
CDKL2Q92772 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17■□□□□ 0.31
CDKL2Q92772 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
CDKL2Q92772 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDKL2Q92772 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CDKL2Q92772 ALOX12P2-203ENST00000570921 1945 ntBASIC17■□□□□ 0.31
CDKL2Q92772 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17■□□□□ 0.31
CDKL2Q92772 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDKL2Q92772 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CDKL2Q92772 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms