Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTF1Q92541 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTF1Q92541 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
RTF1Q92541 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTF1Q92541 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
RTF1Q92541 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC21.87■■□□□ 1.09
RTF1Q92541 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC21.87■■□□□ 1.09
RTF1Q92541 KRT8P23-201ENST00000560090 1207 ntBASIC21.87■■□□□ 1.09
RTF1Q92541 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.87■■□□□ 1.09
RTF1Q92541 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.87■■□□□ 1.09
RTF1Q92541 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.87■■□□□ 1.09
RTF1Q92541 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTF1Q92541 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC21.87■■□□□ 1.09
RTF1Q92541 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTF1Q92541 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTF1Q92541 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC21.87■■□□□ 1.09
RTF1Q92541 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTF1Q92541 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTF1Q92541 AC005332.8-201ENST00000622750 2735 ntBASIC21.86■■□□□ 1.09
RTF1Q92541 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTF1Q92541 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RTF1Q92541 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RTF1Q92541 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC21.86■■□□□ 1.09
RTF1Q92541 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTF1Q92541 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RTF1Q92541 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.86■■□□□ 1.09
RTF1Q92541 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.86■■□□□ 1.09
RTF1Q92541 FAM58DP-201ENST00000428076 619 ntBASIC21.86■■□□□ 1.09
RTF1Q92541 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
RTF1Q92541 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTF1Q92541 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RTF1Q92541 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RTF1Q92541 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC21.86■■□□□ 1.09
RTF1Q92541 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC21.86■■□□□ 1.09
RTF1Q92541 LINC01225-203ENST00000563550 1244 ntBASIC21.86■■□□□ 1.09
RTF1Q92541 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC21.86■■□□□ 1.09
RTF1Q92541 SIGLEC29P-201ENST00000599873 1114 ntBASIC21.86■■□□□ 1.09
RTF1Q92541 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.86■■□□□ 1.09
RTF1Q92541 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
RTF1Q92541 LINC00895-201ENST00000629028 1637 ntBASIC21.86■■□□□ 1.09
RTF1Q92541 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC21.86■■□□□ 1.09
RTF1Q92541 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTF1Q92541 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.86■■□□□ 1.09
RTF1Q92541 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTF1Q92541 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC21.86■■□□□ 1.09
RTF1Q92541 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.86■■□□□ 1.09
RTF1Q92541 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTF1Q92541 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC21.86■■□□□ 1.09
RTF1Q92541 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTF1Q92541 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC21.85■■□□□ 1.09
RTF1Q92541 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTF1Q92541 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTF1Q92541 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTF1Q92541 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTF1Q92541 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
RTF1Q92541 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC21.85■■□□□ 1.09
RTF1Q92541 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC21.85■■□□□ 1.09
RTF1Q92541 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTF1Q92541 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTF1Q92541 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTF1Q92541 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RTF1Q92541 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RTF1Q92541 AL645608.8-201ENST00000606034 2086 ntBASIC21.85■■□□□ 1.09
RTF1Q92541 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC21.85■■□□□ 1.09
RTF1Q92541 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
RTF1Q92541 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC21.85■■□□□ 1.09
RTF1Q92541 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTF1Q92541 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC21.85■■□□□ 1.09
RTF1Q92541 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTF1Q92541 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RTF1Q92541 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC21.85■■□□□ 1.09
RTF1Q92541 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
RTF1Q92541 ORC5-208ENST00000626700 344 ntTSL 3 BASIC21.85■■□□□ 1.09
RTF1Q92541 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC21.85■■□□□ 1.09
RTF1Q92541 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RTF1Q92541 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
RTF1Q92541 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RTF1Q92541 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RTF1Q92541 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC21.85■■□□□ 1.09
RTF1Q92541 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.85■■□□□ 1.09
RTF1Q92541 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.85■■□□□ 1.09
RTF1Q92541 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTF1Q92541 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTF1Q92541 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTF1Q92541 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTF1Q92541 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTF1Q92541 AC060834.1-201ENST00000443027 2032 ntBASIC21.84■■□□□ 1.09
RTF1Q92541 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RTF1Q92541 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RTF1Q92541 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RTF1Q92541 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTF1Q92541 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RTF1Q92541 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC21.84■■□□□ 1.09
RTF1Q92541 HNRNPFP1-201ENST00000391730 1133 ntBASIC21.84■■□□□ 1.09
RTF1Q92541 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RTF1Q92541 HMGN1P19-201ENST00000436976 333 ntBASIC21.84■■□□□ 1.09
RTF1Q92541 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC21.84■■□□□ 1.09
RTF1Q92541 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC21.84■■□□□ 1.09
RTF1Q92541 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RTF1Q92541 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms