Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC25.76■■□□□ 1.71
CASKIN1Q8WXD9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC25.76■■□□□ 1.71
CASKIN1Q8WXD9 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC25.76■■□□□ 1.71
CASKIN1Q8WXD9 AC018470.1-201ENST00000624790 3129 ntBASIC25.76■■□□□ 1.71
CASKIN1Q8WXD9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC25.76■■□□□ 1.71
CASKIN1Q8WXD9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC25.76■■□□□ 1.71
CASKIN1Q8WXD9 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC25.76■■□□□ 1.71
CASKIN1Q8WXD9 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CASKIN1Q8WXD9 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CASKIN1Q8WXD9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
CASKIN1Q8WXD9 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
CASKIN1Q8WXD9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC25.75■■□□□ 1.71
CASKIN1Q8WXD9 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC25.75■■□□□ 1.71
CASKIN1Q8WXD9 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC25.75■■□□□ 1.71
CASKIN1Q8WXD9 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CASKIN1Q8WXD9 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC25.75■■□□□ 1.71
CASKIN1Q8WXD9 COX5BP8-201ENST00000416911 349 ntBASIC25.75■■□□□ 1.71
CASKIN1Q8WXD9 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CASKIN1Q8WXD9 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CASKIN1Q8WXD9 STOM-203ENST00000538954 1257 ntTSL 5 BASIC25.75■■□□□ 1.71
CASKIN1Q8WXD9 NAA38-207ENST00000576861 556 ntTSL 3 BASIC25.75■■□□□ 1.71
CASKIN1Q8WXD9 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
CASKIN1Q8WXD9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
CASKIN1Q8WXD9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
CASKIN1Q8WXD9 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CASKIN1Q8WXD9 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC25.75■■□□□ 1.71
CASKIN1Q8WXD9 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
CASKIN1Q8WXD9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CASKIN1Q8WXD9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CASKIN1Q8WXD9 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CASKIN1Q8WXD9 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC25.74■■□□□ 1.71
CASKIN1Q8WXD9 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CASKIN1Q8WXD9 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CASKIN1Q8WXD9 SSH2-210ENST00000582084 560 ntTSL 3 BASIC25.74■■□□□ 1.71
CASKIN1Q8WXD9 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC25.74■■□□□ 1.71
CASKIN1Q8WXD9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CASKIN1Q8WXD9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
CASKIN1Q8WXD9 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
CASKIN1Q8WXD9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC25.74■■□□□ 1.71
CASKIN1Q8WXD9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC25.74■■□□□ 1.71
CASKIN1Q8WXD9 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CASKIN1Q8WXD9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
CASKIN1Q8WXD9 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
CASKIN1Q8WXD9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
CASKIN1Q8WXD9 AC006538.1-201ENST00000567905 1585 ntBASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 SPDYE17-201ENST00000412399 783 ntBASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 RNA5-8SN1-201ENST00000610460 153 ntBASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 RNA5-8SN5-202ENST00000612463 153 ntBASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 RNA5-8SN4-201ENST00000613359 153 ntBASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 RNA5-8SN5-201ENST00000619471 153 ntBASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC25.73■■□□□ 1.71
CASKIN1Q8WXD9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC25.72■■□□□ 1.71
CASKIN1Q8WXD9 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
CASKIN1Q8WXD9 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
CASKIN1Q8WXD9 AC024267.1-201ENST00000582320 895 ntBASIC25.72■■□□□ 1.71
CASKIN1Q8WXD9 SRP9-204ENST00000619790 377 ntTSL 2 BASIC25.72■■□□□ 1.71
CASKIN1Q8WXD9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
CASKIN1Q8WXD9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC25.72■■□□□ 1.71
CASKIN1Q8WXD9 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
CASKIN1Q8WXD9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CASKIN1Q8WXD9 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CASKIN1Q8WXD9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC25.72■■□□□ 1.71
CASKIN1Q8WXD9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CASKIN1Q8WXD9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CASKIN1Q8WXD9 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CASKIN1Q8WXD9 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 SPDYE18-201ENST00000510091 1050 ntBASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 ARL16-202ENST00000570561 768 ntTSL 2 BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 AL132655.2-201ENST00000596276 594 ntBASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
CASKIN1Q8WXD9 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms