Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS3Q8IXF0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS3Q8IXF0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS3Q8IXF0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 GK-202ENST00000378941 458 ntTSL 3 BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 AL138828.2-201ENST00000615812 383 ntBASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 FOXO1B-201ENST00000504678 1527 ntBASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NPAS3Q8IXF0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 SPDYE22P-201ENST00000582158 798 ntBASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 AC022144.1-201ENST00000602255 1580 ntBASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS3Q8IXF0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 AL138688.1-201ENST00000624851 1594 ntBASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 PIN1P1-201ENST00000412108 996 ntBASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 PRYP6-201ENST00000514804 343 ntBASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NPAS3Q8IXF0 AL662799.1-202ENST00000614205 422 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms