Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 AC211486.1-202ENST00000416371 468 ntBASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 RPS8P6-201ENST00000426177 609 ntBASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 AC211476.1-201ENST00000503899 468 ntBASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 AC107918.2-201ENST00000530817 355 ntBASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 AC005412.3-201ENST00000580309 715 ntBASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 AC068137.2-201ENST00000605408 478 ntBASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM48Q8IWZ4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM48Q8IWZ4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM48Q8IWZ4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM48Q8IWZ4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM48Q8IWZ4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
TRIM48Q8IWZ4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 AC011270.2-201ENST00000624293 2550 ntBASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 SLC25A1P3-201ENST00000395415 828 ntBASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 HTR5BP-201ENST00000430851 1154 ntBASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 FAM58CP-201ENST00000435741 640 ntBASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 AC004967.1-201ENST00000453589 447 ntBASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 ALG1L5P-201ENST00000482043 771 ntBASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM48Q8IWZ4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM48Q8IWZ4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms