Protein–RNA interactions for Protein: Q6X4T0

C12orf54, Uncharacterized protein C12orf54, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54Q6X4T0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 FAM207CP-201ENST00000443486 507 ntBASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 MIR6752-201ENST00000618442 71 ntBASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 AL161938.1-201ENST00000569833 2180 ntBASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C12orf54Q6X4T0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 COX5BP2-201ENST00000392354 334 ntBASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 SPDYE11-202ENST00000450699 704 ntBASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 FAM86C2P-203ENST00000528684 1004 ntBASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 SPDYE9P-201ENST00000570642 692 ntBASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 LINC02560-201ENST00000596379 459 ntBASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 AC026120.1-201ENST00000611536 926 ntBASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 SPDYE10P-202ENST00000612005 668 ntBASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 SPDYE8P-202ENST00000612377 668 ntBASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
C12orf54Q6X4T0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms