Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.71□□□□□ -0.37
LINC01559Q495D7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC01559Q495D7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01559Q495D7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01559Q495D7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01559Q495D7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC01559Q495D7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
LINC01559Q495D7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01559Q495D7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01559Q495D7 CD70-202ENST00000423145 881 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC01559Q495D7 AC103564.2-201ENST00000432853 1299 ntBASIC12.71□□□□□ -0.37
LINC01559Q495D7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.71□□□□□ -0.37
LINC01559Q495D7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01559Q495D7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC01559Q495D7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC01559Q495D7 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC01559Q495D7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC01559Q495D7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.71□□□□□ -0.37
LINC01559Q495D7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01559Q495D7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.71□□□□□ -0.37
LINC01559Q495D7 AC008507.2-201ENST00000588402 1176 ntBASIC12.71□□□□□ -0.37
LINC01559Q495D7 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC01559Q495D7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
LINC01559Q495D7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC01559Q495D7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01559Q495D7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01559Q495D7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01559Q495D7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01559Q495D7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01559Q495D7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.71□□□□□ -0.38
LINC01559Q495D7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01559Q495D7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
LINC01559Q495D7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01559Q495D7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
LINC01559Q495D7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01559Q495D7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01559Q495D7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC01559Q495D7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC01559Q495D7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01559Q495D7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC01559Q495D7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
LINC01559Q495D7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01559Q495D7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01559Q495D7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01559Q495D7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
LINC01559Q495D7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01559Q495D7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01559Q495D7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01559Q495D7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC01559Q495D7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01559Q495D7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01559Q495D7 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01559Q495D7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01559Q495D7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01559Q495D7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01559Q495D7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01559Q495D7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01559Q495D7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01559Q495D7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 TUBB8P12-201ENST00000308911 1335 ntBASIC12.7□□□□□ -0.38
LINC01559Q495D7 TUBB7P-202ENST00000428444 1305 ntBASIC12.7□□□□□ -0.38
LINC01559Q495D7 TUBB8P7-204ENST00000567960 1332 ntBASIC12.7□□□□□ -0.38
LINC01559Q495D7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01559Q495D7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01559Q495D7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01559Q495D7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01559Q495D7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01559Q495D7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 MTCYBP15-201ENST00000433123 1127 ntBASIC12.7□□□□□ -0.38
LINC01559Q495D7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 AL162253.1-201ENST00000443792 758 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 AL441883.1-201ENST00000566170 1045 ntBASIC12.7□□□□□ -0.38
LINC01559Q495D7 STK25P1-201ENST00000585406 838 ntBASIC12.7□□□□□ -0.38
LINC01559Q495D7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01559Q495D7 AL353770.4-202ENST00000621296 1126 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 BX005040.1-201ENST00000622281 1126 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 AC020978.9-201ENST00000624380 1141 ntBASIC12.7□□□□□ -0.38
LINC01559Q495D7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01559Q495D7 AL035563.1-201ENST00000609087 1539 ntBASIC12.7□□□□□ -0.38
LINC01559Q495D7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01559Q495D7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01559Q495D7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.7□□□□□ -0.38
LINC01559Q495D7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01559Q495D7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms