Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 RNA5SP416-201ENST00000516838 111 ntBASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 BCAR1-209ENST00000546196 1340 ntBASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRICKLE4Q2TBC4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 AC025580.3-201ENST00000617932 1424 ntBASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 RNU1-129P-201ENST00000384064 167 ntBASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 KRT19P2-202ENST00000557173 1012 ntBASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 U1.21-201ENST00000580816 167 ntBASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRICKLE4Q2TBC4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 AL031731.1-201ENST00000642131 2094 ntBASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 MIR574-201ENST00000385209 96 ntBASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PRICKLE4Q2TBC4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms